Query= MSMg01no204_p17.b1 MSMg01no204_p17.b1 CHROMAT_FILE:
MSMg01no204_p17.b1 PHD_FILE: MSMg01no204_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:44 2005
(258 letters)
>mm_chr10_80661232_80661889
Length = 658
Score = 441 bits (228), Expect = e-128
Identities = 246/254 (96%), Gaps = 7/254 (2%)
Strand = Plus / Minus
Query: 4 ggaattctagagagttcccgagggattcctgagatctttcttctctcatctgagcctccc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ggaattctagagagttcccgagggattcctgagatctttcttctctcatctgagcctccc 398
Query: 64 tctacttctttcggacaccaaagccaagtctcactctatagggttatttggaatctccta 123
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tctacttctttcggaaaccaaagccaagtctcactctatagggttatttggaatctccta 338
Query: 124 aatacacacacacacaacacatgctgcctgtcctgcaaccagcatacctgtctcctctca 183
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aatacacacacaca--acacatgctgcctgtcctgcaaccagcatacctgtctcctctca 280
Query: 184 cacacaaccatacaccccctgaaccatggtgacagtctcagtgtgattttttgttttgtt 243
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 279 cacacaaccatacaccccctgaaccatggtgacagtctcagtgtgatttttt--tttgtt 222
Query: 244 tggtttt-tttttt 256
| |||| ||||||
Sbjct: 221 t--ttttgtttttt 210
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 258
Length of database: 658
Length adjustment: 9
Effective length of query: 249
Effective length of database: 649
Effective search space: 161601
Effective search space used: 161601
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no204_p17.g1 MSMg01no204_p17.g1 CHROMAT_FILE:
MSMg01no204_p17.g1 PHD_FILE: MSMg01no204_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:26:44 2005
(250 letters)
>mm_chr10_80506926_80507575
Length = 650
Score = 453 bits (234), Expect = e-132
Identities = 246/250 (98%)
Strand = Plus / Plus
Query: 1 ccatgagatcaaggataggatgacacagatgggtcaatgtctatgtctcccgcccaggct 60
|||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 201 ccatgagatcaaggataggatgacacagatgggtcaatgtctatgtctgctgcccaggct 260
Query: 61 gaggatggtgctggactggacacaaaattaggattggctgatggctgtaaagatggaggg 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 gaggatggtgctggactggacacaaagttaggattggctgatggctgtaaagatggaggg 320
Query: 121 gaagctggaaagagacatggatggtccacacgctgggcagaagtcacaggcctcagtcct 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagctggaaagagacacggatggtccacacgctgggcagaagtcacaggcctcagtcct 380
Query: 181 atgtggcacaggccactggaataaggcaggcgggggcacctgctgggacctgcaaccagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtggcacaggccactggaataaggcaggcgggggcacctgctgggacctgcaaccagg 440
Query: 241 cgagggtgtg 250
||||||||||
Sbjct: 441 cgagggtgtg 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
