Query= MSMg01no205_j20.b1 MSMg01no205_j20.b1 CHROMAT_FILE:
MSMg01no205_j20.b1 PHD_FILE: MSMg01no205_j20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:31 2005
(185 letters)
>mm_chr10_97340248_97340832
Length = 585
Score = 337 bits (174), Expect = 3e-97
Identities = 183/186 (98%), Gaps = 2/186 (1%)
Strand = Plus / Minus
Query: 1 tagatttgaagacagttctaaactgagttcaccttttgccctatcaaaaatgttcctaag 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 385 tagatttgaagacagttctaaactgagtttaccttttgccctatcaaaaatgttcctaag 326
Query: 61 taagatctattttggcaccttgctgtctacctctgacttttctctgacagaccaattaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taagatctattttggcaccttgctgtctacctctgacttttctctgacagaccaattaat 266
Query: 121 atgttgcaattcttcttaaacaaagc-aggtttgtggaaatgaagatatttaaaatcaga 179
|||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 265 atgttgcaattcttcttaaacaaa-ctaggtttgtggaaatgaagatatttaaaatcaga 207
Query: 180 tatttt 185
||||||
Sbjct: 206 tatttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 185
Length of database: 585
Length adjustment: 8
Effective length of query: 177
Effective length of database: 577
Effective search space: 102129
Effective search space used: 102129
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no205_j20.g1 MSMg01no205_j20.g1 CHROMAT_FILE:
MSMg01no205_j20.g1 PHD_FILE: MSMg01no205_j20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:31 2005
(345 letters)
>mm_chr10_97230537_97231281
Length = 745
Score = 661 bits (342), Expect = 0.0
Identities = 342/342 (100%)
Strand = Plus / Plus
Query: 1 aggatatctctgtaccattgagataactaggcagcccctttgaaaaagacaccagagctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aggatatctctgtaccattgagataactaggcagcccctttgaaaaagacaccagagctc 260
Query: 61 caggaaaaagggtttgttgaagagggggctccaaccaaaattaaggtgcagtagcaagct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caggaaaaagggtttgttgaagagggggctccaaccaaaattaaggtgcagtagcaagct 320
Query: 121 acatagcaaggcttgcagaacttcatgctatgagtcatctgcaaccttttgcaaaatcca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acatagcaaggcttgcagaacttcatgctatgagtcatctgcaaccttttgcaaaatcca 380
Query: 181 acgtggcaaaagtactgagttattatgatgtaccatgtgcgatcccaatttgtcatcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acgtggcaaaagtactgagttattatgatgtaccatgtgcgatcccaatttgtcatcttc 440
Query: 241 ccttgacatatcttttattgaggggtacaagaagaaaccccacattggctgaggaaaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccttgacatatcttttattgaggggtacaagaagaaaccccacattggctgaggaaaatt 500
Query: 301 ctacttgcttcccacacggagatttaaaaatatatttctgga 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ctacttgcttcccacacggagatttaaaaatatatttctgga 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
