Query= MSMg01no205_j23.b1 MSMg01no205_j23.b1 CHROMAT_FILE:
MSMg01no205_j23.b1 PHD_FILE: MSMg01no205_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:32 2005
(659 letters)
>mm_chr10_99317569_99318626
Length = 1058
Score = 1257 bits (650), Expect = 0.0
Identities = 656/658 (99%), Gaps = 1/658 (0%)
Strand = Plus / Minus
Query: 2 ttcctctgggttatgtatactttgagcatggggctatctctccttgtcactctatagctc 61
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 858 ttcctctgggttatgtatactttgagcatggggctatctctccttgtcact-tatagctc 800
Query: 62 ttaatttgctacactgtcatattccataatacctaatcatttaaatactttttctgtata 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 799 ttaatttgctacactgtcatattccataatacctaatcatttaaatactttttctgtata 740
Query: 122 tgttgtgggtgaattaaagccctagcaccttcattaaagcattttcagaataccacttta 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tgttgtgggtgaattaaagccctagcaccttcattaaagcattttcagaataccacttta 680
Query: 182 aatttattatcaatgactttatttacctaccttcctatactgattaaaagttacaataat 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 aatttattatcaatgactttatttacctaccttcctatactgattaaaagttacaataat 620
Query: 242 ataaagaggttttggaattttaataaatgttctataaaatatatattacctcacttgttg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ataaagaggttttggaattttaataaatgttctataaaatatatattacctcacttgttg 560
Query: 302 gaaaatctgtttcaagcaatatcatagtgggaccaaatacagtttataatactatttatt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 gaaaatctgtttcaagcaatatcatagtgggaccaaatacagtttataatactatttatt 500
Query: 362 taaacttttgtttgcttccagagaatataatgcattgagggaaacagaaaatattcaact 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 taaacttttgtttgcttccagagaatataatgcattgagggaaacagaaaatattcaact 440
Query: 422 tctaaatttaaagcttacatttcgccaaatattaaagttccaaatagaattatgtttcct 481
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 439 tctaaatttaaagcttacatttcgccaaatattaaagttccaaatagaattatgtttcgt 380
Query: 482 ggtggacatgtcctgagccagtgtacaaattctttcctgttgtttaagaatgtatcagtg 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 ggtggacatgtcctgagccagtgtacaaattctttcctgttgtttaagaatgtatcagtg 320
Query: 542 atgctgcatggctttattgtgtcttgtttctctcccaaggctgaattcactaccagcagc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 atgctgcatggctttattgtgtcttgtttctctcccaaggctgaattcactaccagcagc 260
Query: 602 ccaggaggttgccatatagaaaagtgtaactctataatcacataggaggtgtgaaaag 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 ccaggaggttgccatatagaaaagtgtaactctataatcacataggaggtgtgaaaag 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1058
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1048
Effective search space: 680152
Effective search space used: 680152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no205_j23.g1 MSMg01no205_j23.g1 CHROMAT_FILE:
MSMg01no205_j23.g1 PHD_FILE: MSMg01no205_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:32 2005
(355 letters)
>mm_chr10_99243793_99244547
Length = 755
Score = 656 bits (339), Expect = 0.0
Identities = 351/355 (98%)
Strand = Plus / Plus
Query: 1 aatgaaatagaggatagtaataggttatgctctggcgccgattgaaaaagcctgcgaaac 60
||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||
Sbjct: 201 aatgaaatagaggatagtaataggttatgctctgggggtgattgaaaaagcctgccaaac 260
Query: 61 aaggctatgacttccacagcaggacatttcaaaggatgaaaagtgttccagtatatagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggctatgacttccacagcaggacatttcaaaggatgaaaagtgttccagtatatagag 320
Query: 121 caagtcatgatgcttaaaagtcctaaacttactgaagatatggtaaaactgttacatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagtcatgatgcttaaaagtcctaaacttactgaagatatggtaaaactgttacatatt 380
Query: 181 atgtgtgtatagatatgttccttatctatcaatctagcatcctactattgaagcccaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtgtgtatagatatgttccttatctatcaatctagcatcctactattgaagcccaggc 440
Query: 241 tatggaagtcagagcatgaatgagaagaaacggtaatgtagggagagaaagtagtagaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatggaagtcagagcatgaatgagaagaaacggtaatgtagggagagaaagtagtagaga 500
Query: 301 tttcacattcatctataggtgaaaatgtacagatgttatgacaacattgtttgaa 355
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttcacattcatctataggtgaaaatgtacagatgttatgacaacattgtttgaa 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 755
Length adjustment: 9
Effective length of query: 346
Effective length of database: 746
Effective search space: 258116
Effective search space used: 258116
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
