Query= MSMg01no206_b05.b1 MSMg01no206_b05.b1 CHROMAT_FILE:
MSMg01no206_b05.b1 PHD_FILE: MSMg01no206_b05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:08 2005
(683 letters)
>mm_chr10_112857770_112858857
Length = 1088
Score = 1154 bits (597), Expect = 0.0
Identities = 661/685 (96%), Gaps = 7/685 (1%)
Strand = Plus / Minus
Query: 5 gaattcacaacaacctcttgcccaagtgttttagaagatgaagaaaagcaagtgcaatgt 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 gaattcacaacaacct-ttgcccaagtgttttagaagatgaagaaaagcaagtgcaatgt 830
Query: 65 gttctgctttaataagttagggagccaaaactacattttgtttcagggtactttttcact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 gttctgctttaataagttagggagccaaaactacattttgtttcagggtactttttcact 770
Query: 125 tcctctggtctgaaaaatctatacttatcaagacaatgaaacattgtg--ttttttttcc 182
||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 769 tcctctggtctgaaaaatctatacttatcaagacaattaaacattgtgttttttttttct 710
Query: 183 tgtacatgtgtcatatctattagaagtgtctagtaatcaacattgtccaatgttaaatat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 709 tgtacatgtgtcatatctattagaagtgtctagtaatcaacattgtccaatgtaaaatat 650
Query: 243 ctacatggaatagacattgagaactcatattc----caaaaaagaaaaattggttgatta 298
|||||||||||||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 649 ctacatggaatagacattgaaaactcatattctaaaaaaaaaagaaaaattggttgattc 590
Query: 299 tggattatagaaaactagagtgtagaatatattgaaaaatatgtctgggggcaataaaat 358
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 589 tggattatagaaaactagagtgtagaatatattgaaaaatatatctgggggcaataaaat 530
Query: 359 gttaaaatcttaaaactaaacattagtaaataaaaataggttcaagtgttaactgatata 418
||||||||||||||| ||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 529 gttaaaatcttaaaattaaacattagtaaataaaaataggttcgagtgttaactgagata 470
Query: 419 cacaagaataacgaacatacatgtaatcaggaaattaagcagtagagacagaaggagtcc 478
||||||||||| ||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 469 cacaagaataaggaacatacatgaaatcaggaaattaagcactagagacagaaggagtcc 410
Query: 479 aaggtcattctctaggatacggggcaaaagacgtccctggacaatgaaaccttatcttta 538
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 409 aaggtcattctctaggatacggggcaaaagacatccctggacaatgaaaccttatctttt 350
Query: 539 aaaaagtattattaatttatctttatgaggctttgaactatctaataaagcaatctaaca 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 aaaaagtattattaatttatctttatgaggctttgaactatctaataaagcaatctaaca 290
Query: 599 ttcatatttgctatacattcctaagcataacttataccaggaaaggaatttgatttttat 658
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 ttcatatttgctatatattcctaagcataacttataccaggaaaggaatttgatttttat 230
Query: 659 aaatatgacaaataacatttctatc 683
|||||||| ||||||||||||||||
Sbjct: 229 aaatatgaaaaataacatttctatc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 683
Length of database: 1088
Length adjustment: 10
Effective length of query: 673
Effective length of database: 1078
Effective search space: 725494
Effective search space used: 725494
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no206_b05.g1 MSMg01no206_b05.g1 CHROMAT_FILE:
MSMg01no206_b05.g1 PHD_FILE: MSMg01no206_b05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:08 2005
(646 letters)
>mm_chr10_112718637_112719683
Length = 1047
Score = 1162 bits (601), Expect = 0.0
Identities = 632/643 (98%), Gaps = 3/643 (0%)
Strand = Plus / Plus
Query: 1 accggggactgaatcttttaactagcatttcctatccatcccttctctttctaacttatc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 201 accggggactgaatcttttaactagtatttcctatccatcccttctctttctaacttatc 260
Query: 61 ctttgctcttgtttcttaacacttccaatcttttacttctttatttggtcctcttccatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctttgctcttgtttcttaacacttccaatcttttacttctttatttggtcctcttccatc 320
Query: 121 taagttatgaaattattttttttt-atgttgaaggcaattggaagtctaatatctttttt 179
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 taagttatgaaactattttttttttatgttgaaggcaattggaagtctaatatctttttt 380
Query: 180 tgttgcactttattataactttttctaggtttattaagacctctttacatgtttggtttc 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cgttgcactttattataactttttctaggtttattaagacctctttacatgtttggtttc 440
Query: 240 catttaccccacttgcctcacccaatcccatatttaccttcactttcctaatgttgtgtg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catttaccccacttgcctcacccaatcccatatttaccttcactttcctaatgttgtgtg 500
Query: 300 agactatacacctggagagatgtgatcaaagatctcgctccacatcaaaaactggtgaga 359
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 agactatacacctggagagatgtgatcaaagatctcgctccagatcaaaaactggtgaga 560
Query: 360 gaacaaagtgcagatgacattatccttgacttggtgacccagtgagttttattgggatgc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaacaaagtgcagatgacattatccttgacttggtgacccagtgagttttattgggatgc 620
Query: 420 ttaaaggaataaggccaaggggtcacaggaacagatgtgactgaaagtcagcagaatccc 479
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttaaaggaataaggtcaaggggtcacaggaacagatgtgactgaaagtcagcagaatcct 680
Query: 480 atagttcattctagtacgtgtgacagttcagaaaaatctagaaacctgaatcacacagca 539
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 681 atagttcattctagtacgtgtaacagttcagaaaaatctagaaacctgaatcacacagca 740
Query: 540 caacttactactcagcaggcgtaaaaagtatcctttcctggttactcggttggtgtgagt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 caacttactactcagcaggcgtaaaaagtatcctttcctggttactcggttggtgtgagt 800
Query: 600 cttttcctagcagctcagctaattttgattttgattttcctag 642
||||||||||||||||| |||||||||||||||||||||||
Sbjct: 801 cttttcctagcagctcaa--aattttgattttgattttcctag 841
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1047
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1037
Effective search space: 659532
Effective search space used: 659532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
