Query= MSMg01no206_f22.b1 MSMg01no206_f22.b1 CHROMAT_FILE:
MSMg01no206_f22.b1 PHD_FILE: MSMg01no206_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:32 2005
(242 letters)
>mm_chr10_19536602_19537238
Length = 637
Score = 429 bits (222), Expect = e-125
Identities = 235/242 (97%), Gaps = 5/242 (2%)
Strand = Plus / Minus
Query: 1 taaaagttaatgaaaacatttcaatttgcatcagacaaaaggttaatgttagtatatagg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 437 taaaagttaatgaaaacatttcaat-----tcagacaaaaggttaatgttagtatatagg 383
Query: 61 aaagacattacagtcaacaaggaaaattctaatactccattagacatcagggaaaatcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 aaagacattacagtcaacaaggaaaattctaatactccattagacatcagggaaaatcta 323
Query: 121 ttttcaaaaagaaatcaaattataaatgggagctaattaataaagaaatgttcatagagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ttttcaaaaagaaatcaaattataaatgggagctaattaataaagaaatgttcatagagt 263
Query: 181 aatatgtgtatatactttaaaaaaagctttcatttctcaaaatgacaaaatcattttgag 240
|||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 262 aatatgtgtatatacttttaaaaaagctttcatttctcaaaatgacaaaaccattttgag 203
Query: 241 tg 242
||
Sbjct: 202 tg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 637
Length adjustment: 9
Effective length of query: 233
Effective length of database: 628
Effective search space: 146324
Effective search space used: 146324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no206_f22.g1 MSMg01no206_f22.g1 CHROMAT_FILE:
MSMg01no206_f22.g1 PHD_FILE: MSMg01no206_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:28:32 2005
(233 letters)
>mm_chr10_19447893_19448525
Length = 633
Score = 397 bits (205), Expect = e-115
Identities = 226/233 (96%)
Strand = Plus / Plus
Query: 1 tcaatttatctaggaaggggaaggacacaattcaaactatagtgtcaaaaattaagtcaa 60
||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 201 tcaatgtatctaggaagggggaggacacaattcaaactatagtgccaaaaattaagtcaa 260
Query: 61 atgaataaatgggatggaaggaaacagtatttttcattcatacaggtagaagtgaccata 120
|||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 atgaataaatggaatggaaggaaacagtatttttcattcatacaggtggaagtgaccata 320
Query: 121 gtgtgttctatatgaaaggctgtgagctcaagtgaaggggaaagttatagaagtacatag 180
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 321 gtgtgttctatatgaaaggctgtgagctcaagtgaaggggaaagttataaaagtacatag 380
Query: 181 atttactatggtttctagtgaatagatcatcaacgtaaaagaaactagagtga 233
||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 atttactatggtttcaagtgaatagatcatcaacgtaaaagaaactagagtga 433
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 233
Length of database: 633
Length adjustment: 9
Effective length of query: 224
Effective length of database: 624
Effective search space: 139776
Effective search space used: 139776
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
