Query= MSMg01no208_f05.b1 MSMg01no208_f05.b1 CHROMAT_FILE:
MSMg01no208_f05.b1 PHD_FILE: MSMg01no208_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:32:06 2005
(315 letters)
>mm_chr10_56676759_56677472
Length = 714
Score = 563 bits (291), Expect = e-165
Identities = 306/311 (98%), Gaps = 1/311 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgtttttgtttttttgtttttttaaatcaccatcacctgtgtgcaaagatggt 63
|||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctgtttttgtttttgt-tttttttaaatcaccatcacctgtgtgcaaagatggt 262
Query: 64 catagcacttttaccttcatagaattaagagcaatgccttctcttttccatgatctacca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 catagcacttttaccttcatagaattaagagcaatgccttctcttttccatgatctacca 322
Query: 124 tgtactaggccctaggaaagctaacacaatgaaattaatatttattatggcaaaactcca 183
||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 323 tgtactaggccctagcaaagctaacacaatgaaattaatatttattatgacaaaactcca 382
Query: 184 gagaaaaattctactttgaagtattttgctataagtttcagaagacctcatggtaagttt 243
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gagacaaattctactttgaagtattttgctataagtttcagaagacctcatggtaagttt 442
Query: 244 cctcatgcataaaacagtacttaaaaagtagaggttaaataattattgtttgtcattatc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cctcatgcataaaacagtacttaaaaagtagaggttaaataattattgtttgtcattatc 502
Query: 304 tctgttcaaat 314
|||||||||||
Sbjct: 503 tctgttcaaat 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 714
Length adjustment: 9
Effective length of query: 306
Effective length of database: 705
Effective search space: 215730
Effective search space used: 215730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no208_f05.g1 MSMg01no208_f05.g1 CHROMAT_FILE:
MSMg01no208_f05.g1 PHD_FILE: MSMg01no208_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:32:06 2005
(229 letters)
>mm_chr10_56789953_56790581
Length = 629
Score = 389 bits (201), Expect = e-113
Identities = 222/229 (96%)
Strand = Plus / Minus
Query: 1 tcagtatcttagccctgtcccattctcagatggatatgatgtctttggggacactggtta 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 429 tcagtatcttagccctgtcccattctcagatagatatgatgtctttggggacactggcta 370
Query: 61 atgaactgtagctaaagctttctcctctcttcagtgttacagattaataagatcagggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atgaactgtagctaaagctttctcctctcttcagtgttacagattaataagatcagggat 310
Query: 121 tgttagctgtaatataatcatatatctggaccatgggaaaatgagccttgtgaaagtgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tgttagctgtaatataatcatatatctggaccatgggaaaatgagccttgtgaaagtgct 250
Query: 181 atggcaggctgtttttttttaaaaatgtccgtgtattaggcaaggttct 229
|||||||||||| |||| ||||||||| |||||||||||||||||||
Sbjct: 249 atggcaggctgtgttttcagaaaaatgtctgtgtattaggcaaggttct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
