Query= MSMg01no208_h19.b1 MSMg01no208_h19.b1 CHROMAT_FILE:
MSMg01no208_h19.b1 PHD_FILE: MSMg01no208_h19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:32:19 2005
(264 letters)
>mm_chr10_122901610_122902273
Length = 664
Score = 472 bits (244), Expect = e-137
Identities = 259/264 (98%)
Strand = Plus / Plus
Query: 1 aaagtcagatgattgtgatctctgtgctagtgataagggataaattatctgtatcgtaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 aaagtcagatgattgtgatctctgtgctagtgataagggataaattatctgtatcgtgaa 260
Query: 61 gtcacttttgaaggaggaggaatgctttcattgaatttgtcatttcatcaagttagagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtcacttttgaaggaggaggaatgctttcattgaatttgtcatttcatcaagttagagtt 320
Query: 121 taaaacggaaatgaataaaactattctctctcttaacaaattccttgtatagctagggtg 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 321 taaaacggaaatgaataaaactattctctctcttatcaaattccttgtatagctagggtg 380
Query: 181 tttgtcagccttccatgaaagctcttgtataaaagatcaaggaagctcaatatttgcaat 240
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 tttgtcagtcttccatgaaagctcttgtataaaagattaaggaagctcaatatttgcaat 440
Query: 241 tagttattgttcatgcagctgagt 264
||||||||||| ||||||||||||
Sbjct: 441 tagttattgtttatgcagctgagt 464
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 664
Length adjustment: 9
Effective length of query: 255
Effective length of database: 655
Effective search space: 167025
Effective search space used: 167025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no208_h19.g1 MSMg01no208_h19.g1 CHROMAT_FILE:
MSMg01no208_h19.g1 PHD_FILE: MSMg01no208_h19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:32:19 2005
(251 letters)
>mm_chr10_123047882_123048532
Length = 651
Score = 379 bits (196), Expect = e-110
Identities = 238/252 (94%), Gaps = 2/252 (0%)
Strand = Plus / Minus
Query: 1 aaaaggatggcagaattatcttggaaaggaatgtacgacggtgtgaccctaaaatgtaaa 60
|||||||||||||||||||||||||||||||||| || |||||||||||||||||||||
Sbjct: 451 aaaaggatggcagaattatcttggaaaggaatgtgggatggtgtgaccctaaaatgtaaa 392
Query: 61 taaatattaaagcatacttcc-agcaaaaaagggaatatattttaagtgcaatttttggt 119
|||| |||||||||||||||| | ||||||||||||||||||||||||| ||||||||||
Sbjct: 391 taaagattaaagcatacttccta-caaaaaagggaatatattttaagtggaatttttggt 333
Query: 120 tgtcttaaagtccagcatttgaattaatgatggagtgctttaaaacatctacattaaaac 179
||| |||||||||| ||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 332 tgttttaaagtccaacatttgaattaataatggagtgctttaaaccatctacattaaaac 273
Query: 180 aagaaaatacaaggatatctgatatcatcattgctccatcaaactcttttggaacttcgg 239
||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 272 aagaaaatataaggatatctgatatcatcattgctccatcaaactcttttgtaacttctg 213
Query: 240 ctatatgttttg 251
||||||||||||
Sbjct: 212 ctatatgttttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 251
Length of database: 651
Length adjustment: 9
Effective length of query: 242
Effective length of database: 642
Effective search space: 155364
Effective search space used: 155364
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
