Query= MSMg01no210_n18.b1 MSMg01no210_n18.b1 CHROMAT_FILE:
MSMg01no210_n18.b1 PHD_FILE: MSMg01no210_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:33 2005
(327 letters)
>mm_chr10_112133503_112134229
Length = 727
Score = 516 bits (267), Expect = e-151
Identities = 309/323 (95%), Gaps = 2/323 (0%)
Strand = Plus / Plus
Query: 5 gaattcactatcttcctccctcttgtgataggataatcttttaatgtgccattaggacct 64
||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 205 gaattcactatcttcctccttcttgtgataggataatcctttaatgtgccattaggacct 264
Query: 65 caggaagaggggtagacattgttctcatctcccctggggaaggcattttaacaacaaata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caggaagaggggtagacattgttctcatctcccctggggaaggcattttaacaacaaata 324
Query: 125 catagtcatcactgttgcatggaatatgaagag-tcccatctctcattttcatttaggga 183
||||||||||||||||||||||||| ||||| | || ||||||||||||||| |||||||
Sbjct: 325 catagtcatcactgttgcatggaatttgaag-gatcacatctctcattttcacttaggga 383
Query: 184 ataatgaataatagaacgtaatttctatgaataaccagaatattgcatgtattcactgaa 243
||||||||||||||||| ||||||||||||||| |||||||||||| || ||||||||||
Sbjct: 384 ataatgaataatagaacttaatttctatgaatagccagaatattgcgtgcattcactgaa 443
Query: 244 tgtagcatgcatgtacattttcacagtcaacatttgtgttgtagtttgtttaaactgcaa 303
||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 444 tgtagcatgcatgtacattttcatagtcaacatttgtgtagtagtttgtttaaactgcaa 503
Query: 304 ggaattttgcttatcttttgtag 326
|||||||||||||||||| ||||
Sbjct: 504 ggaattttgcttatctttcgtag 526
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no210_n18.g1 MSMg01no210_n18.g1 CHROMAT_FILE:
MSMg01no210_n18.g1 PHD_FILE: MSMg01no210_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:33 2005
(279 letters)
>mm_chr10_112245029_112245707
Length = 679
Score = 476 bits (246), Expect = e-139
Identities = 270/278 (97%), Gaps = 1/278 (0%)
Strand = Plus / Minus
Query: 1 tggtacaggaaaggtttcatagaatgggggatgggtggacagagtctatgaagaattaac 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tggtacaggaaaggtttaatagaatgggggatgggtggacagagtctatgaagaattaac 573
Query: 61 actaaaggcgttttg-aaaaatcatatggaaacctacactataggatcagtgtgtgtgtc 119
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 actaaaggcattttgaaaaaatcatatggaaacctacactataggatcagtgtgtgtgtc 513
Query: 120 tgtgtgtgcgcgtgtgtgtgtctctgtgtgtgtgtataaatggagtcatcctacagcagg 179
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 tgtgtgtgtgcgtgtgtgtgtctctgtgtgtgtgtataaatggagtcatcctacagcagg 453
Query: 180 tttatatcacccccactagatgccactaaatgatacataagatgcctagtatcaagaaca 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 tttatatcacccccactagatgccactaaatgatacataagatgcctagtatcaagaaca 393
Query: 240 gataattttttattgagctgttagcaaatgaagaccca 277
||||| | |||||||||||||||||||||||| ||||
Sbjct: 392 gataacctcttattgagctgttagcaaatgaagtccca 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
