Query= MSMg01no211_o20.b1 MSMg01no211_o20.b1 CHROMAT_FILE:
MSMg01no211_o20.b1 PHD_FILE: MSMg01no211_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:37:31 2005
(419 letters)
>mm_chr10_123813756_123814575
Length = 820
Score = 555 bits (287), Expect = e-162
Identities = 340/359 (94%), Gaps = 6/359 (1%)
Strand = Plus / Minus
Query: 17 gaattctc-aagggctctgattgtccttattctgtccatgtttataagtcacatgaatga 75
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gaattctcaaagggctctgattgtccttattctgtccatgtttataagtcacatgaatga 299
Query: 76 gacttcaac-tactctactaaatgatcttgagcgttatttcagaattgtattgtcattgt 134
|||||| || ||||||||||||||| ||||||| |||||||||||||||||||| || |
Sbjct: 298 gacttc-acatactctactaaatgaccttgagcattatttcagaattgtattgtggttat 240
Query: 135 gagttagacggttctctaagatggcattttgattgattggggttgtctgtaattgtctgt 194
||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gagttggactgttctctaagatggcattttgattgattggggttgtctgtaattgtctgt 180
Query: 195 cattacaaggagatgtttccttgatcaataagttgaagactaacctgtatgtgtaggaac 254
||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 179 cattacaagcagatgtttccttgatcaataagttgaagactaacctgtacgtgtaggaac 120
Query: 255 aaatatttagaatgtaattagagatgttgtatatttactaaagtagttgattttt---ta 311
||||||||||||||||||||||||||||||| ||||||||||||||| |||| || ||
Sbjct: 119 aaatatttagaatgtaattagagatgttgtagatttactaaagtagtcgattcttctcta 60
Query: 312 agatctatgacttcgctatcgctgtgtacttggctctgtttccaggttcagacatgttt 370
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 agatctatgacttcactatcgctgtgtacttggctctgtttccaggttcagacatgttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 820
Length adjustment: 9
Effective length of query: 410
Effective length of database: 811
Effective search space: 332510
Effective search space used: 332510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no211_o20.g1 MSMg01no211_o20.g1 CHROMAT_FILE:
MSMg01no211_o20.g1 PHD_FILE: MSMg01no211_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:37:32 2005
(380 letters)
>mm_chr10_123751235_123752014
Length = 780
Score = 694 bits (359), Expect = 0.0
Identities = 371/375 (98%)
Strand = Plus / Plus
Query: 3 cccaggtaggagatttaagcaacatatgtgcttcttgaacttgtcttatgaaattggaat 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cccaggtaggagatttaagcaacatatgtgcttcttgaacttgtcttatgaaattggaat 262
Query: 63 tgttatgaaaatgcagacttcaacttagtacatcctaggcagagcccgcaatcccacata 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgttatgaaaatgcagacttcaacttagtacatcctaggcagagcccgcaatcccacata 322
Query: 123 tctgtagggattgcaaagcatgacaacgttacttctttaaataccagtttgtgtagcaag 182
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 323 tctgtagggattgcaaagcatgacaaagttacttctttaaataccagtttgtgtagcaag 382
Query: 183 tttagaacttgttacaggtaagttggtcagtaaattcaggtagctagcaagtactttaat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tttagaacttgttacaggtaagttggtcagtaaattcaggtagctagcaagtactttaat 442
Query: 243 tgctgtaattatggattctgatgctaagaatataaaatatgcctttaatttcaaaatatt 302
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgttgtaattatggattctgatgctaagaatataaaatatgcctttaatttcaaaatatt 502
Query: 303 tacacaaagatcaaatattttgcttactaatagatattaatatgcaaaaattaatttgaa 362
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 503 tacacaaagatcaaatattttgcttacaaatagatattaatatgtaaaaattaatttgaa 562
Query: 363 tcatgtaatgtacgt 377
|||||||||||||||
Sbjct: 563 tcatgtaatgtacgt 577
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 380
Length of database: 780
Length adjustment: 9
Effective length of query: 371
Effective length of database: 771
Effective search space: 286041
Effective search space used: 286041
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
