Query= MSMg01no213_l16.b1 MSMg01no213_l16.b1 CHROMAT_FILE:
MSMg01no213_l16.b1 PHD_FILE: MSMg01no213_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:50 2005
(320 letters)
>mm_chr10_6645679_6646397
Length = 719
Score = 578 bits (299), Expect = e-169
Identities = 311/315 (98%), Gaps = 2/315 (0%)
Strand = Plus / Plus
Query: 5 gaattcagctgttgagagcataggtcaaatggggctagctagcttcatggacacgggcca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattcagctgttgagagcataggtcaaatggggctagctagcttcatggacacgggcca 263
Query: 65 accaatcagatggcacaccggatggaaacaagaatcaatgtaaagttctgtgtttgagtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 accaatcagatggcacaccggatggaaacaagaatcaatgtaaagttctgtgtttgagtt 323
Query: 125 tgaaaaaaaaa-tcaataactcaagtgcagttcatgtaaaagatgatggggagttttact 183
||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 324 tgaaaaaaaaaatcaataactcaagtgcagttcatgtaaaagatgatggggagttt-act 382
Query: 184 tggcttctctccaatacccacgtatagaaaaatcaacttgtgtagcttcctacggatgca 243
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 383 tggcttctctccaatacccacgtatagaaaaatcaacttgtgtagcttcctatggatgca 442
Query: 244 ttttacagcctgtttatattggaggcttagccaggtagtggcaccgctttaagttagatt 303
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 443 ttttacagcctgtttatattggaggcttagccagggagtggcaccgctttaagttagatt 502
Query: 304 tctgtgctgagctgt 318
|||||||||||||||
Sbjct: 503 tctgtgctgagctgt 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 719
Length adjustment: 9
Effective length of query: 311
Effective length of database: 710
Effective search space: 220810
Effective search space used: 220810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no213_l16.g1 MSMg01no213_l16.g1 CHROMAT_FILE:
MSMg01no213_l16.g1 PHD_FILE: MSMg01no213_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:39:50 2005
(287 letters)
>mm_chr10_6806697_6807383
Length = 687
Score = 487 bits (252), Expect = e-142
Identities = 279/288 (96%), Gaps = 1/288 (0%)
Strand = Plus / Minus
Query: 1 tagtccacactgcagacgtacccagcatggactcaggctgcttatgtcccatttatcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tagtccacactgcagacgtacccagcatggactcaggctgcttatgtcccatttatcttc 577
Query: 61 taatggctttggcatgttatttgacctattcatgcctcattcatatgagtgaaaatggga 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 taatggctttggcatgtcatttgacctattcatgcctcattcatatgagtgaaaatggga 517
Query: 121 gcagtagcgggatctatgacatgaggttt-ggggagcacctgtgatttagtatgtggagt 179
||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |
Sbjct: 516 gcagtagcgggatctatgacatgaggttttggggagcacctgtgatttagtacgtggaat 457
Query: 180 atggaggagccacaagggaggctttccgtgagtaatggttctctcccccatcattccttc 239
||||||||||||||||||| |||||| |||||||||||||||||| |||||| |||||||
Sbjct: 456 atggaggagccacaagggaagctttctgtgagtaatggttctctctcccatccttccttc 397
Query: 240 ctccctcatccccagctgtgagaacaatacaagcgagaaggaacaaaa 287
||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 396 ctccctcatccccagctgtgagaacaatacaagcgaggaggaacaaaa 349
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
