TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTTGAACTATTAAAATGTGAGTGGCAGCGGTTAAGAGCACTGACT
GCTCTTCCACAGGTCCTGGGTTCAATTCCCAGAAATCACATTGTGGCTTA
CAACCATCTGTAATAGGATCTGATGCCCTCTTCTGGTGTGTCTGAAGACA
ACTACAGTGTACTCATATAAATAAAATAAATTTTAAAAAATTAAAATGTG
AGTGGTTTATTGTGGTCTCACAAAATTCTGTGGTGATTAGAAAGTCCATT
GTGAATTTTCTCTTAGGTACTGAATAATACCATGACCTAAAGAATAATTT
AAATAGCACGTGCTTAATAAAAATATATTCTAAATGAAAATTAAAGACTA
AATGTTTATTTTCCTCCCATGATGTACTCCTTAGAGCTCTTATGTAATTT
GATGAATAGTTTATTCATCTAGCAATTGTGAACTGTGGCTGCTGGGAAAT
GAACTCTGATTATCTGTAAGAGCAGCACATGTTCTTAACCACTGAGCCAT
CTCCCCATATCCTCAAAATTATTCCCCTTGTTCCATCATTGAATTTCTTC
TCTAATGTCTATATATTCATTTTTCTAGGATCAGTATTTTTTTTAACAGA
AGAAAGTTAGTTATAAATAAAATAAAGTTACCCTCTATAACAACCAGACA
TCAAAGAT

ACATTGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXCTGATCTTTCCAAAACTTTTATCATG
AATGGGTGTTGGATCTTGTCAAATGCTTTTTCTGCATCTAACGAGATGAT
CATGTGGTTTTTGTCTTTGAGTTTGTTTATATAATGGATTACATTGATGG
ATTTTCGTATATTAAACCATCCCTGCATCCCTGGAATAAAACCTACTTGG
TCAGGATGGATGATTTCTTTAATGTGTTCTTGGATTCGGTTAGCGAGAAT
TTTATTAAGGATTTTTGCATCGATATTCATAAGAGAAATTGGTCTGAAGT
TCTCTATCTTTGTTGGATCTTTCTGTGGTTTAGGTATCAGAGTAATAGTG
GCTTCATAAAATGAGTTGGGTAGAGTACCTTCTACTTCTATCTTGTGAAA
TAGTTTGTGCAGAACTGGAATTAGATCTTCTTTGAAGGTCTGATAGAACT
CTGCACTAAACCCATCTGGTCCTGGGCTTTTTTTGGTTGGGAGACTATTA
ATAACTGCTTCTATTTCTTTAGGGGATATGGGACTGTTTAGAAGGTCAAC
TTGATCCTGATTCAACTTTGGTACCTGGTATCTGTCCAGAAATTTGTCCA
TTTCGTCCAGGTTTTCCAGTTTTGTTGAGTATAAGCTTTTGTAGAAGGAT
CTGATG

Query= MSMg01no214_b04.b1 MSMg01no214_b04.b1 CHROMAT_FILE:
MSMg01no214_b04.b1 PHD_FILE: MSMg01no214_b04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:17 2005
         (661 letters)



>mm_chr10_28724919_28725979
          Length = 1061

 Score = 1241 bits (642), Expect = 0.0
 Identities = 654/658 (99%), Gaps = 1/658 (0%)
 Strand = Plus / Minus

                                                                       
Query: 4   ggaattcttttgaactattaaaatgtgagtggcagcggttaagagcactgactgctcttc 63
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 826 ggaattcttttgaactattaaaatgtgagtggcagcggttaagaacactgactgctcttc 767

                                                                       
Query: 64  cacaggtcctgggttcaattcccagaaatcacattgtggcttacaaccatctgtaatagg 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 cacaggtcctgggttcaattcccagaaatcacattgtggcttacaaccatctgtaatagg 707

                                                                       
Query: 124 atctgatgccctcttctggtgtgtctgaagacaactacagtgtactcatataaataaaat 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 atctgatgccctcttctggtgtgtctgaagacaactacagtgtactcatataaataaaat 647

                                                                       
Query: 184 aaattttaaaaaattaaaatgtgagtggtttattgtggtctcacaaaattctgtggtgat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 aaattttaaaaaattaaaatgtgagtggtttattgtggtctcacaaaattctgtggtgat 587

                                                                       
Query: 244 tagaaagtccattgtgaattttctcttaggtactgaataataccatgacctaaagaataa 303
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 tagaaagtccattgagaattttctcttaggtactgaataataccatgacctaaagaataa 527

                                                                       
Query: 304 tttaaatagcacgtgcttaataaaaatatattctaaatgaaaattaaagactaaatgttt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tttaaatagcacgtgcttaataaaaatatattctaaatgaaaattaaagactaaatgttt 467

                                                                       
Query: 364 attttcctcccatgatgtactccttagagctcttatgtaatttgatgaatagtttattca 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 attttcctcccatgatgtactccttagagctcttatgtaatttgatgaatagtttattca 407

                                                                       
Query: 424 tctagcaattgtgaactgtggctgctgggaaatgaactctgattatctgtaagagcagca 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 tctagcaattgtgaactgtggctgctgggaaatgaactctgattatctgtaagagcagca 347

                                                                       
Query: 484 catgttcttaaccactgagccatctccccatatcctcaaaattattccccttgttccatc 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 catgttcttaaccactgagccatctccccatatcctcaaaattattccccttgttccatc 287

                                                                       
Query: 544 attgaatttcttctctaatgtctatatattcatttttctaggatcagtattttttttaac 603
           ||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||
Sbjct: 286 attgaatttcttctctaatgtctatatattcatttttttaggatcagtattttttt-aac 228

                                                                     
Query: 604 agaagaaagttagttataaataaaataaagttaccctctataacaaccagacatcaaa 661
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 agaagaaagttagttataaataaaataaagttaccctctataacaaccagacatcaaa 170


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space:   684201
Effective search space used:   684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)