Query= MSMg01no214_d05.b1 MSMg01no214_d05.b1 CHROMAT_FILE:
MSMg01no214_d05.b1 PHD_FILE: MSMg01no214_d05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:27 2005
(670 letters)
>mm_chr10_126157221_126158284
Length = 1064
Score = 1166 bits (603), Expect = 0.0
Identities = 649/669 (97%), Gaps = 12/669 (1%)
Strand = Plus / Plus
Query: 5 gaattcaccaaggttggtaaatttatagcctgtgactattgctaaccctcggcatgtttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccaaggttggtaaatttatagcctgtgactattgctaaccctcggcatgtttt 264
Query: 65 atgatgttgtgc--tccgattaaaaatgggcttttggaacacagtttagttttgtacgaa 122
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgatgttgtgcaat--gattaaaaatgggcttttggaacacagtttagttttgtacgaa 322
Query: 123 gacggtttgacagcaaggcagtccctctcacttcagagcgcatagaagaaaacaacccag 182
||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 323 gacagtttgacagcaaggcagtccctctcacttcaga------agaagaaaacaacccag 376
Query: 183 cgaagaaaagtcttctttatgatagagatcagaaagcataatcaaattttaatctttttt 242
||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 377 cgaagaaaattcttctttatgatagagatcagaaagcataatcacattttaatctttttt 436
Query: 243 tttagaaaactttcatctccattgattagtcagctttctaacccctttattttgtttagt 302
|| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 ttcagaaaactttcatctcaattgattagtcagctttctaacccctttattttgtttagt 496
Query: 303 agatcataaatccaatttaatagcacactgaaactaatctgagatccaatagatgtttgt 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 agatcataaatccaatttaatagcacactgaaactaatctgagatccaatagatgtttgt 556
Query: 363 tagttttccctttaattaaaaatcatttccttcgtaaaggagactcacaattctactttt 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tagttttccctttaattaaaaatcatttccttcgtaaaggagactcacaattctactttt 616
Query: 423 ctatcttatttctcaaaaggggagcttatatcacgtctgtatacaacctacctgctggca 482
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 617 ctatcttatttctcaaaaggggagtttatatcacgtctgtatacaacctacctgctggca 676
Query: 483 agagtgatatccaagcatattggatagtagcaagctgaagtgttcaaggctctagaaata 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 agagtgatatccaagcatattggatagtagcaagctgaagtgttcaaggctctagaaata 736
Query: 543 tctttaagtatgttcttcataagaaaggagtattggttaagatagtaagtcggtttggta 602
||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 737 tctataagtatgttcttcataagaaaggagtattggttaagatagtaagtcagtttggta 796
Query: 603 aaggtggttaagattaccactactgcccaggcaatgatggtgcacaccttata-ccccag 661
|||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||
Sbjct: 797 aaggtggttaagattaccactactgcccaggcaatgatggtgcacacctt-taaccccag 855
Query: 662 tgctcaggt 670
|||||||||
Sbjct: 856 tgctcaggt 864
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1064
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1054
Effective search space: 695640
Effective search space used: 695640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no214_d05.g1 MSMg01no214_d05.g1 CHROMAT_FILE:
MSMg01no214_d05.g1 PHD_FILE: MSMg01no214_d05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:40:27 2005
(288 letters)
>mm_chr10_126271869_126272556
Length = 688
Score = 489 bits (253), Expect = e-143
Identities = 277/285 (97%)
Strand = Plus / Minus
Query: 1 cttccctgccttttgctttctttgttctccatgatcaaggatgatggccaatgtttccag 60
||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||
Sbjct: 485 cttccctgccttttgctttctttgttctccatgataaaggatgatggttaatgtttccag 426
Query: 61 agagctgtctttgtaactgctaataaaacatccttcgacccttgtgtgaggaaccgtccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 agagctgtctttgtaactgctaataaaacatccttcgacccttgtgtgaggaaccgtccc 366
Query: 121 tacggataggtctgcttgcctcggaatgcacattgtcctggattatcggggaagtatcta 180
|||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 365 tacggataggtctgtttgcctcggaatgcatattgtcctggattatcggggaagtatcta 306
Query: 181 agagaaatagggtatgatgtcacttaactaaattaaagcactgcaaagcaataatggatt 240
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 305 agagaaatagggtatgatgtcacttaactaaattaaagcactacaaagcaataatggatt 246
Query: 241 ctctattgagccccttttgggaacaacaaacatacatatttataa 285
|||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 245 ctctattgagccccttttgggaacaacaaatgtacatatttataa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
