Query= MSMg01no217_o18.b1 MSMg01no217_o18.b1 CHROMAT_FILE:
MSMg01no217_o18.b1 PHD_FILE: MSMg01no217_o18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:46 2005
(425 letters)
>mm_chr10_75148941_75149767
Length = 827
Score = 766 bits (396), Expect = 0.0
Identities = 408/412 (99%), Gaps = 2/412 (0%)
Strand = Plus / Plus
Query: 16 gaattcagaaa-cactgcctgccaa-ctcagcttggacggggctctgcgctctgtgtaga 73
||||||||||| |||||||||| || ||||||||||||||||||||||||||||||||||
Sbjct: 216 gaattcagaaaacactgcctgctaaactcagcttggacggggctctgcgctctgtgtaga 275
Query: 74 gcacattctccagttgttcagattgccaaagacaggcatgaactcactgactgatggcga 133
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 gcacattctccagttgttcagattgccaaagacaggcatgaactcactgactgatggcga 335
Query: 134 agcacaaaaggatagaggctcccgggggctcccagctaattacacctgaggcccagatgg 193
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 agcacaaaaggatagaggctcccgggggctcccagctaattacacctgaggcccagatgg 395
Query: 194 gagctcaaagggctcaggaaactgtcaggagatttggctggtgccaccccagggagggct 253
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gagctcaaaaggctcaggaaactgtcaggagatttggctggtgccaccccagggagggct 455
Query: 254 ggagatgggtggcctcttggtgggcctctttctttctttcctgcagttctaatgtggtac 313
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggagatgggtggcctcttggtgggcctctttctttctttcctgcagttctaatgtggtac 515
Query: 314 tttcaaggtgagagtaggtgaccacgtcggcagggtgagcactgcaccctaattccttct 373
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 tttcaaggtgagagtaggtgaccacgtcggcagggtgagcactgcaccctaattccttct 575
Query: 374 gagctacaaaactcccactttgcaacaagaaaactgaggccaaggaaaagtt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gagctacaaaactcccactttgcaacaagaaaactgaggccaaggaaaagtt 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 827
Length adjustment: 9
Effective length of query: 416
Effective length of database: 818
Effective search space: 340288
Effective search space used: 340288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_o18.g1 MSMg01no217_o18.g1 CHROMAT_FILE:
MSMg01no217_o18.g1 PHD_FILE: MSMg01no217_o18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:45:46 2005
(276 letters)
>mm_chr10_75169060_75169735
Length = 676
Score = 499 bits (258), Expect = e-146
Identities = 267/270 (98%)
Strand = Plus / Minus
Query: 1 agctatccagaaaacagatgtagtgctggccagggagggtaagtcctccccaaaggctca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 agctatccagaaaacagatgtagtgctggccagggagggtaagtcctccccaaaggctca 383
Query: 61 aagtgatgtgtgggaataccacacaaaaggaatctgaccctgctctcccagaagtctctg 120
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 382 aagtgatgtgtgggaataccacccaaaaggaatctgaccctgctctcccagaagtctctg 323
Query: 121 gtgcaacttctggcctaaagagctaagacgactactctgcagagggccttctgggggtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 322 gtgcaacttctggcctaaagagctaagacgactactctgcagagggccttctgggagtca 263
Query: 181 gtgtggtcagtagcatcttttttccttctgccccactggtaagcctcacgggcatggctt 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 262 gtgtggtcagtagcatcttttttccttctgccccactggtaagcctcaagggcatggctt 203
Query: 241 ctggaggaggaggaggaggaggaggaggag 270
||||||||||||||||||||||||||||||
Sbjct: 202 ctggaggaggaggaggaggaggaggaggag 173
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 18
Number of successful extensions: 18
Number of sequences better than 10.0: 1
Number of HSP's gapped: 18
Number of HSP's successfully gapped: 1
Length of query: 276
Length of database: 676
Length adjustment: 9
Effective length of query: 267
Effective length of database: 667
Effective search space: 178089
Effective search space used: 178089
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
