Query= MSMg01no218_i07.b1 MSMg01no218_i07.b1 CHROMAT_FILE:
MSMg01no218_i07.b1 PHD_FILE: MSMg01no218_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:33 2005
(257 letters)
>mm_chr10_6238064_6238720
Length = 657
Score = 458 bits (237), Expect = e-133
Identities = 249/253 (98%)
Strand = Plus / Plus
Query: 5 gaattctattgaagaatgcagaacagttctgattgtggacgtcagggagtggggattgga 64
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctattgaagaatggagaacagttctgattgtggacgtcagggagtggggattgga 264
Query: 65 ggttagccttgtatcccagtatctcggatgcatgatagcaattgaatgtggaatgactaa 124
||||||||||||||| ||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 265 ggttagccttgtatctcagtatctccgatgcctgatagcaattgaatgtggaatgactaa 324
Query: 125 gcataacattgcttcatccagctagaattttcccacctgcaggggtcagttccctgagtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gcataacattgcttcatccagctagaattttcccacctgcaggggtcagttccctgagtg 384
Query: 185 tcatcccgccccccaccccccattccttctccttagtcatcccaccaggaagttaccaca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcatcccgccccccaccccccattccttctccttagtcatcccaccaggaagttaccaca 444
Query: 245 atgtctctcagag 257
|||||||||||||
Sbjct: 445 atgtctctcagag 457
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 257
Length of database: 657
Length adjustment: 9
Effective length of query: 248
Effective length of database: 648
Effective search space: 160704
Effective search space used: 160704
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no218_i07.g1 MSMg01no218_i07.g1 CHROMAT_FILE:
MSMg01no218_i07.g1 PHD_FILE: MSMg01no218_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:46:33 2005
(252 letters)
>mm_chr10_6401982_6402632
Length = 651
Score = 456 bits (236), Expect = e-133
Identities = 248/252 (98%), Gaps = 1/252 (0%)
Strand = Plus / Minus
Query: 1 ttttctgaaataatttgtaagacttaaggggattaagctttcttatggaatacctttgtt 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 451 ttttctgaaataatttgtaagacttaaggggattaagctttcttatggaatagctttg-t 393
Query: 61 aaaggaatttcttggaacttgtcacatgccccatttatattcatagtgtgcaaactgagc 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 aaaggagtttcttggaacttgtcacatgccccatttatattcatagtgtgcaaactgagc 333
Query: 121 cacattaattgagcgtaaagatgaagggagtgctttcatgtgtcaagtgttaaaatggaa 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 332 cacattaattgagcgtaaagatgaagggagtgcttccatgtgtcaagtgttaaaatggaa 273
Query: 181 ctagaaaaccactttccagagattaagctgtcatttgagtttgaaattaactccagctat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 ctagaaaaccactttccagagattaagctgtcatttgagtttgaaattaactccagctat 213
Query: 241 aacctcagtata 252
||||||||||||
Sbjct: 212 aacctcagtata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 252
Length of database: 651
Length adjustment: 9
Effective length of query: 243
Effective length of database: 642
Effective search space: 156006
Effective search space used: 156006
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
