Query= MSMg01no233_a23.b1 MSMg01no233_a23.b1 CHROMAT_FILE:
MSMg01no233_a23.b1 PHD_FILE: MSMg01no233_a23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:42 2005
(229 letters)
>mm_chr10_127467917_127468545
Length = 629
Score = 427 bits (221), Expect = e-124
Identities = 224/225 (99%)
Strand = Plus / Minus
Query: 5 gaattcatccagctgctgagggggaaaagtcactaaaacagaaaatgtttgataaagaac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gaattcatccagctgctgagggggaaaagtcactaaaacagaaaatgtttgataaagaac 370
Query: 65 attctattgagttctaatcttgttcatctttggaaatgttggtgggtttagttatctggt 124
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 attctattgagttctaatattgttcatctttggaaatgttggtgggtttagttatctggt 310
Query: 125 taaaaataattttaaggaggaacaagagagccaaagaaaatatttgacatgaaagacaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 taaaaataattttaaggaggaacaagagagccaaagaaaatatttgacatgaaagacaaa 250
Query: 185 gggagggttgtttgggggggagaagggggcgatgagacaggaagt 229
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 gggagggttgtttgggggggagaagggggcgatgagacaggaagt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 229
Length of database: 629
Length adjustment: 9
Effective length of query: 220
Effective length of database: 620
Effective search space: 136400
Effective search space used: 136400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no233_a23.g1 MSMg01no233_a23.g1 CHROMAT_FILE:
MSMg01no233_a23.g1 PHD_FILE: MSMg01no233_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:49:42 2005
(524 letters)
>mm_chr10_127332086_127333011
Length = 926
Score = 951 bits (492), Expect = 0.0
Identities = 517/526 (98%), Gaps = 2/526 (0%)
Strand = Plus / Plus
Query: 1 acacagggaaaggcaggtattggtgagccatacctaaacaagcaagccttcatcatgggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 acacagggaaaggcaggtattggtgagccatacctaaacaagcaagccttcatcatgggc 260
Query: 61 tgggacccagctctggaatctgctggtcagacaactacatgagggtgctggctgaacatc 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 tgggacccagctctggaatctgctggccagacaactacatgagggtgctggctgaacatc 320
Query: 121 taatctgatagagaaaggagttgagcagcagaagaacaggacctcagacatactggagac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 taatctgatagagaaaggagttgagcagcagaagaacaggacctcagacatactgaagac 380
Query: 181 catgaccctggacatcaacaagccatagagcatggctgcagtctctaaagggtgaaggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgaccctggacatcaacaagccatagagcatggctgcagtctctaaagggtgaaggaa 440
Query: 241 tgggtgtggggatccgggcagtgggcagtcagaggtactacccacattcctgtctgtgtc 300
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgggtgcggggatcagggcagtgggcagtcagaggtactacccacattcctgtctgtgtc 500
Query: 301 ttgtctctgagtaaagggaacaatctttactggcaagattcttcaaagatctgagaagct 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 ttgtctctgagtaaagggaacaatctttactggcaagattcttcaaagatctgagaagtt 560
Query: 361 taggagtaaaaaaaa--tcacaatagaaaaactaattaataataataataaccaaataga 418
|||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 taggggtaaaaaaaaaatcacaatagaaaaactaattaataataataataaccaaataga 620
Query: 419 aacaacttctagcttccttttctttttcttaagatttatttattttatgtatgtgagtat 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aacaacttctagcttccttttctttttcttaagatttatttattttatgtatgtgagtat 680
Query: 479 actgtagctttacagacggttgtgagcctagatgtggttgttggga 524
||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 681 actgtagctttacagacagttgtgagcctagatgtggttgttggga 726
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 926
Length adjustment: 10
Effective length of query: 514
Effective length of database: 916
Effective search space: 470824
Effective search space used: 470824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
