Query= MSMg01no233_e24.b1 MSMg01no233_e24.b1 CHROMAT_FILE:
MSMg01no233_e24.b1 PHD_FILE: MSMg01no233_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:00 2005
(320 letters)
>mm_chr10_111222259_111222978
Length = 720
Score = 528 bits (273), Expect = e-154
Identities = 312/341 (91%), Gaps = 25/341 (7%)
Strand = Plus / Plus
Query: 5 gaattcattccagtgacctgataaaagccacagacctgataaatggcagaaccaggcttg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 gaattcattccagtgacctgataaaagccacagacctgataaatggcagaaccaggcttg 239
Query: 65 gg-------------------------ttctttctccatcttggattacatctctatctg 99
|| ||||||||||||||||||||| |||||||||||
Sbjct: 240 ggttcagacaccaagcctattctttctttctttctccatcttggattatatctctatctg 299
Query: 100 gtaaataagacatgagaagacttatgtgaggggtctctagtcattccctggctcgtttct 159
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 300 gtaaataagacatgagaagacttatgtgaggggtctctagtcattccctggcttgtttct 359
Query: 160 attttcttgctgtctctgtgggaatggaatgcagaagtgggaaagtgacctttgggtgac 219
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 attttcttgctgtctctgtgggaatggaatgcagaagtgggaaagtgacctttgggtgac 419
Query: 220 gctgaccatggcgttcccaggacactggaagaggcggtgctctttttcatatctgggaac 279
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 gctgaccatggcgttcccaggacactggaagaggcggtgctctttttcatatctgggaac 479
Query: 280 cattgggccagtggttctcaaccttcctcgtgccatgaccc 320
||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 480 cattgggccagtggttcccaaccttccttgtgccatgaccc 520
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no233_e24.g1 MSMg01no233_e24.g1 CHROMAT_FILE:
MSMg01no233_e24.g1 PHD_FILE: MSMg01no233_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:00 2005
(294 letters)
>mm_chr10_111362084_111362777
Length = 694
Score = 565 bits (292), Expect = e-165
Identities = 292/292 (100%)
Strand = Plus / Minus
Query: 1 actgacggtgctttcttcgcttgctaagctcagagcaagagatgctggtagcacttaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 actgacggtgctttcttcgcttgctaagctcagagcaagagatgctggtagcacttaata 433
Query: 61 ttcagaatcactaaagcatacattaaagaaagtgtgcctataaaaacgaaatctttctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ttcagaatcactaaagcatacattaaagaaagtgtgcctataaaaacgaaatctttctgt 373
Query: 121 agtaaacttttaaggagaaggtatttgtcaaattaatgacgacggatcaggaaaaaactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 agtaaacttttaaggagaaggtatttgtcaaattaatgacgacggatcaggaaaaaactg 313
Query: 181 gttgctctggtttgaaaaatcactaaaatttgctacggtgaataacttacttaataaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gttgctctggtttgaaaaatcactaaaatttgctacggtgaataacttacttaataaata 253
Query: 241 accttttttcctccctttgtgtgcgtaacagtcacacatgctgtatcgttca 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 accttttttcctccctttgtgtgcgtaacagtcacacatgctgtatcgttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 694
Length adjustment: 9
Effective length of query: 285
Effective length of database: 685
Effective search space: 195225
Effective search space used: 195225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
