Query= MSMg01no235_c19.b1 MSMg01no235_c19.b1 CHROMAT_FILE:
MSMg01no235_c19.b1 PHD_FILE: MSMg01no235_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:26 2005
(349 letters)
>mm_chr10_124052819_124053564
Length = 746
Score = 582 bits (301), Expect = e-170
Identities = 336/349 (96%), Gaps = 4/349 (1%)
Strand = Plus / Minus
Query: 1 tattcattatattaaaaaccaagtgtgctcttaagaaggagaactatacagaatcttttt 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 649 tattcattatattaaaaaccaagtgttctcttaagaaggagaactatacagaatcttttt 590
Query: 61 attttttttttttaccaaaaaattaaaatttgaaaaataattgcctggaacatctaagta 120
| |||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 589 a-ttttttttttaaccaaaaaattaaaatttgaaaaataattggctggaacatctaagta 531
Query: 121 tagagttggctgagcacaagccgccattcctttttgcttcagtttaagattgctgtactg 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 530 tagagttggctgagcacaa---gccattcctttttgcttcagtttaagattgctgtactg 474
Query: 181 tgactgattcctactgccttctcaagagattgctaccgccttctctcatacaaactcatg 240
||||||||| |||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 473 tgactgattgctaccgccttctcaagagattcctaccgccttctctcatacaaactcatg 414
Query: 241 aggaatttagaaaagtaaaatattggttttcctcatatatgaatatgaagccaattagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aggaatttagaaaagtaaaatattggttttcctcatatatgaatatgaagccaattagaa 354
Query: 301 gaataacattaactttatttttataataaattaccttaatcatgagatt 349
||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gaacaatgttaactttatttttataataaattaccttaatcatgagatt 305
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 746
Length adjustment: 9
Effective length of query: 340
Effective length of database: 737
Effective search space: 250580
Effective search space used: 250580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no235_c19.g1 MSMg01no235_c19.g1 CHROMAT_FILE:
MSMg01no235_c19.g1 PHD_FILE: MSMg01no235_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:26 2005
(346 letters)
>mm_chr10_123933107_123933853
Length = 747
Score = 648 bits (335), Expect = 0.0
Identities = 344/347 (99%), Gaps = 1/347 (0%)
Strand = Plus / Plus
Query: 1 ctgataaagaagcccatacctgggatactaccaagttcatgacatagggaaaaaagaaaa 60
||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 ctgataaagaagcacatacctgggatactaccaagttcatgacatagggaaagaagaaaa 260
Query: 61 atgaaaatagaagaaaaagaacaattcaaggagaagtaagacaatgctaatgagcctcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgaaaatagaagaaaaagaacaattcaaggagaagtaagacaatgctaatgagcctcat 320
Query: 121 gtcgaacttcccaggacaccagctcacacttgggggaaattcatcatgcatctcaccata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcgaacttcccaggacaccagctcacacttgggggaaattcatcatgcatctcaccata 380
Query: 181 gagtttatgatggtatggatgtatttttcatatagggggaaattagtggagggaaaaaa- 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagtttatgatggtatggatgtatttttcatatagggggaaattagtggagggaaaaaaa 440
Query: 240 tattgttatcataccacctaacccatatgttctataatgagaacagataaaaatctgtct 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattgttatcataccacctaacccatatgttctataatgagaacagataaaaatctgtct 500
Query: 300 acattattttctcaaatatttaaacatatggaactttgatcctttag 346
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acattattttctcaaatatttaaacatatggaactttgatcctttag 547
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 346
Length of database: 747
Length adjustment: 9
Effective length of query: 337
Effective length of database: 738
Effective search space: 248706
Effective search space used: 248706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
