Query= MSMg01no235_g03.b1 MSMg01no235_g03.b1 CHROMAT_FILE:
MSMg01no235_g03.b1 PHD_FILE: MSMg01no235_g03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:42 2005
(300 letters)
>mm_chr10_22014955_22015654
Length = 700
Score = 530 bits (274), Expect = e-155
Identities = 291/297 (97%)
Strand = Plus / Plus
Query: 4 ggaattcaattaattcccagcatccacaggtggctcacaaccacaggtaatgacggctgc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaattaattcccagcatccacaggtggctcacaaccacaggtaatgacggctgc 263
Query: 64 agagggccctctctacttgatgggcacctctgcctgtaagacacaagttaattagctggt 123
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 264 agagggccctctctacttgatgggcacctctgcctgtaagacacaagttaatcagctggt 323
Query: 124 aacattatgtatttgtatgagattatgtttggtcaagtttgtataagataaaatttatag 183
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 324 aacattatgtatttgtatgagattgtgtttggtcaagtttgtataagataaaatttatag 383
Query: 184 tatccaatttgtgacatttgaaaatgtctcatgaattgaaagcagaagaaagctcanata 243
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 384 tatccaatttgtgacatttgaaaatgtctcatgaattgaaagcagaagaaagctcaaata 443
Query: 244 gtcttttgtcttcatataatcaacttacattaactctctttggagattttaccacgt 300
||||||||| |||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 444 gtcttttgttttcatatagtcaacttacattaactctctctggagattttaccacgt 500
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 300
Length of database: 700
Length adjustment: 9
Effective length of query: 291
Effective length of database: 691
Effective search space: 201081
Effective search space used: 201081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no235_g03.g1 MSMg01no235_g03.g1 CHROMAT_FILE:
MSMg01no235_g03.g1 PHD_FILE: MSMg01no235_g03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:42 2005
(187 letters)
>mm_chr10_21944932_21945518
Length = 587
Score = 284 bits (147), Expect = 2e-81
Identities = 177/187 (94%), Gaps = 3/187 (1%)
Strand = Plus / Minus
Query: 1 tttagtgtctaataagtgtttggcaaatgaaggccatgatcatcatattcttttgaaact 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 304 tttagtgtctaataagtgtttggcaaatgaaggccaagatcatcatattcttttgaaact 245
Query: 61 aaaatatattttcatctttggaaaactaagataattttttaaagaaaag-aaagaaagaa 119
||||| |||||||||||||||||||||||||||||||||||||| |||| |||| ||| |
Sbjct: 244 aaaatttattttcatctttggaaaactaagataattttttaaaggaaaggaaaggaagga 185
Query: 120 aggaaagaaggaaggaaggaaggaaggaaggaaggaaggagaggaaggag-ggaaggaag 178
||||| |||||||||||||||||||||||||||||||||| ||||||||| ||||||| |
Sbjct: 184 aggaaggaaggaaggaaggaaggaaggaaggaaggaagga-aggaaggagaggaaggagg 126
Query: 179 gaaggaa 185
|||||||
Sbjct: 125 gaaggaa 119
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space: 103641
Effective search space used: 103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
