CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACTGTGTAAGGCCACATTTGCTATTCAAAGAATTTGTATATGAAAT
CCTTCATTTCATTGCAGCTTATGGTTTACCTGGAGAAAGGCTGGAGTTTT
TCAAATTACTCAACAGTTCAAAAAGTTCCACTATTAGAAAAAGCAGTTAA
TCAATCAATTGGAATCCAGGAACCTGTCAGCCCAATTCAGCCCAATCTGT
CCAAGAAAGAAAGAAATCAGTGTCATTTCCTGCATTTGAAAGAACTTTTC
AATAGAAATACATAAAATAAAGTCAATATACGGCCTTTAAGACAAGCATA
GTGGGGCACACCTTTAATCAAAGCACTTCAAAGGCAGAGGCAGGGGGTTC
TCTGTGAGTTGCAGGCAAGCCCTATCTACATAGTAAGTTGCAGGCCAGCC
AGGGTGACAAAGTGACACCCATTGAAATAAGTAAATATTAGTTAAGATTC
TTAAACTTTTCAAACAAAATATGGTAAATATCACCAAAAAAGTATTTCAA
ACAATTACATTTATAAAATTCTTGAATGCATGAGAGAGAAAAGAGCATGA
AGCTAAGGCATCCTACCTATTATTCCAAAGCACACCTTTCTTCTGCTGAG
AAAATATCCCCTGTATTGAGGAAGATCATTCAAAGATGACAGTATGAAGG
TGAACACTGTCCAAAGTTGCTAGGTA

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXAGAAAATCTGGGTTTAAATCCTGGTTTGATAAGCTGCC
TCTTATAAGTAGGTATAGAACGAAAAAAAAAGAAAGAAAAGGAGAAAGGA
AAGAAAAGGAGAAAGGAAAGAAAAGGAGAAAGGAAAGAAAAGGAGAAAGG
AAAGGGAAGGGAAGGGAAGGGAAGGGAAGGGAAGGCCCCCCCNCCCCCCC
CCCTCTTTTTTNCCNCCNCNCCCCCTCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCNNCCCCCCCCTTTTTCNCTTCCTTTCCCCNNCNCCCNNCNNCC
CNCNCNNNNNTTTTTTTTTTCCCCCCCCCCCCCCCNTNNNNTNNTTTTTT
TTTTTTTTTTTTTTCCCCCCCCCCCTTTANAAAATCAAAATATTTTTTGG
TGTCTAAGTTAGTCTCTCTACCCCCCTCCCTTTCTCACCCGACTCCCCTC
TTCTCCACCTTCCTCCCTTCTATACTTCCCCCCCTACTCTCCGCCATCCC
TCCTCCCTTCTCTTCCTCCTCACATCCCTAAGCCCCCTTTAATAACTATC
ATCTTCACTTCGTGCTACTGCCTCCTTTCTTTCCAACATCTTTTCTTAAC
CCACAACCTCCTATCAACGTTTACTCCTTTTTTTCTCTTTTTTCTTTGTC
CATCTCCACCCCTCTAATCTTCTTTCTTCATCCTCCTCTTACTTTCTTCT
C

Query= MSMg01no235_n21.b1 MSMg01no235_n21.b1 CHROMAT_FILE:
MSMg01no235_n21.b1 PHD_FILE: MSMg01no235_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:17 2005
         (682 letters)



>mm_chr10_27610667_27611748
          Length = 1082

 Score = 1265 bits (654), Expect = 0.0
 Identities = 672/678 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcactgtgtaaggccacatttgctattcaaagaatttgtatatgaaatccttcatt 64
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcactgtgtaaggacacatttgctattcaaagaatttgtatatgaaatccttcatt 264

                                                                       
Query: 65  tcattgcagcttatggtttacctggagaaaggctggagtttttcaaattactcaacagtt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 265 tcattgcagcttatggtttacctggagaaaggctggagtttttcaaattactcgacagtt 324

                                                                       
Query: 125 caaaaagttccactattagaaaaagcagttaatcaatcaattggaatccaggaacctgtc 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caaaaagttccactattagaaaaagcagttaatcaatcaattggaatccaggaacctgtc 384

                                                                       
Query: 185 agcccaattcagcccaatctgtccaagaaagaaagaaatcagtgtcatttcctgcatttg 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agcccaattcagcccaatctgtccaagaaagaaagaaatcagtgtcatttcctgcatttg 444

                                                                       
Query: 245 aaagaacttttcaatagaaatacataaaataaagtcaatatacggcctttaagacaagca 304
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 445 aaagaacttttcaatagaaatacataaaataaagtcaatatacagcctttaagacaagca 504

                                                                       
Query: 305 tagtggggcacacctttaatcaaagcacttcaaaggcagaggcagggggttctctgtgag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tagtggggcacacctttaatcaaagcacttcaaaggcagaggcagggggttctctgtgag 564

                                                                       
Query: 365 ttgcaggcaagccctatctacatagtaagttgcaggccagccagggtgacaaagtgacac 424
           |||||||||||   ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttgcaggcaagttttatctacatagtaagttgcaggccagccagggtgacaaagtgacac 624

                                                                       
Query: 425 ccattgaaataagtaaatattagttaagattcttaaacttttcaaacaaaatatggtaaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ccattgaaataagtaaatattagttaagattcttaaacttttcaaacaaaatatggtaaa 684

                                                                       
Query: 485 tatcaccaaaaaagtatttcaaacaattacatttataaaattcttgaatgcatgagagag 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tatcaccaaaaaagtatttcaaacaattacatttataaaattcttgaatgcatgagagag 744

                                                                       
Query: 545 aaaagagcatgaagctaaggcatcctacctattattccaaagcacacctttcttctgctg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaaagagcatgaagctaaggcatcctacctattattccaaagcacacctttcttctgctg 804

                                                                       
Query: 605 agaaaatatcccctgtattgaggaagatcattcaaagatgacagtatgaaggtgaacact 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 agaaaatatcccctgtattgaggaagatcattcaaagatgacagtatgaaggtgaacact 864

                             
Query: 665 gtccaaagttgctaggta 682
           ||||||||||||||||||
Sbjct: 865 gtccaaagttgctaggta 882


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 682
Length of database: 1082
Length adjustment: 10
Effective length of query: 672
Effective length of database: 1072
Effective search space:   720384
Effective search space used:   720384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)