Query= MSMg01no236_c07.b1 MSMg01no236_c07.b1 CHROMAT_FILE:
MSMg01no236_c07.b1 PHD_FILE: MSMg01no236_c07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:38 2005
(248 letters)
>mm_chr10_82438291_82438938
Length = 648
Score = 433 bits (224), Expect = e-126
Identities = 242/248 (97%)
Strand = Plus / Plus
Query: 1 ctggaattgcccagggaggactctcttatagtgtctccaaggggcattgctccgccgaca 60
|||||||||||||||||||||||||||||||||||||||||| ||| |||| |||||||
Sbjct: 201 ctggaattgcccagggaggactctcttatagtgtctccaaggagcactgctgtgccgaca 260
Query: 61 gacatcctgatttcggactcgtggctcccaggcatgcgtcagacgacgcgtttgttttga 120
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 261 gacatcctgatttcggactcgtggctcccaggcatgcgtcagactacgcgtttgttttga 320
Query: 121 gtcaccgagttcatgaagatttgttacactgctccttggcacaactccacggctcaccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtcaccgagttcatgaagatttgttacactgctccttggcacaactccacggctcaccta 380
Query: 181 cagggacctaggattggcttccgcaaacttcacaactgctccaggccagacttctgccaa 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagggacctaggattggcttccgcaaacttcacaactgctccaggccagacttctgccac 440
Query: 241 cgtgtcgg 248
||||||||
Sbjct: 441 cgtgtcgg 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 248
Length of database: 648
Length adjustment: 9
Effective length of query: 239
Effective length of database: 639
Effective search space: 152721
Effective search space used: 152721
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no236_c07.g1 MSMg01no236_c07.g1 CHROMAT_FILE:
MSMg01no236_c07.g1 PHD_FILE: MSMg01no236_c07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:38 2005
(187 letters)
>mm_chr10_82590819_82591405
Length = 587
Score = 284 bits (147), Expect = 2e-81
Identities = 177/187 (94%), Gaps = 2/187 (1%)
Strand = Plus / Minus
Query: 1 caacaacaacaacaacaacaacaaaaacccaaaaaaacaaagccagcaaaagaagtcagt 60
||||||||||||||| || || |||||||||||||| |||||||||||||| ||||||||
Sbjct: 414 caacaacaacaacaaaaaaaaaaaaaacccaaaaaaccaaagccagcaaaataagtcagt 355
Query: 61 gactgccattttaaaatgcagcagaagcacat-ttctaattccacgcttccaacaagagc 119
|||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||
Sbjct: 354 gactgccattttaaaatgcagcagaagcacatctt-taattccacgcttccaacgagagc 296
Query: 120 ggggacacctgtgaatttacagacactggggctgagggacgaagcgctctctattgtatc 179
|||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||
Sbjct: 295 ggggacacctgtgaatttacagacaccggggctgagggacgaagtgctctctattgtatc 236
Query: 180 acaatga 186
|||||||
Sbjct: 235 acaatga 229
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space: 103641
Effective search space used: 103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
