Query= MSMg01no236_h22.b1 MSMg01no236_h22.b1 CHROMAT_FILE:
MSMg01no236_h22.b1 PHD_FILE: MSMg01no236_h22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:04 2005
(578 letters)
>mm_chr10_66915186_66916163
Length = 978
Score = 978 bits (506), Expect = 0.0
Identities = 560/578 (96%)
Strand = Plus / Plus
Query: 1 ttttatttgttagcctattctggctggccagaggttcctggcatctacctgtctccactc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttatttgttagcctattctggctggccagaggttcctggcatctacctgtctccactc 260
Query: 61 tcccagcactgggatcataggcatgtgctaccacacttatggaattcagagtcacacaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 tcccagcactgggatcataggcatgtgctaccacacttatggaattcagagtcccacaca 320
Query: 121 gtctgttccaaaagaagccagctttggccacccaccctcaataagctaaaagagtcaagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtctgttccaaaagaagccagctttggccacccaccctcaataagctaaaagagtcaagt 380
Query: 181 taataataaaacgctgaatttaatttatttaaccttgccacatcaggaagggagacagat 240
||||||||||||||||| ||||||||||||| ||||||||| |||||| |||||||
Sbjct: 381 gaataataaaacgctgaaaagaatttatttaaccgtgccacatcgggaaggcagacagag 440
Query: 241 acccagtgacccctctagttcattttttgaggtcctgaagtaaagttaaaacattgagag 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acccagtgacccccctagttcattttttgaggtcctgaagtaaagttaaaacattgagag 500
Query: 301 aggactagggatacaagtgttccctgtcaaggtgtggttctacccaccatcaacccatga 360
||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 501 aggactaggaatacaagtgttccctgtcaaggtgtggttctacccaccattaacccatga 560
Query: 361 ttgtctctgcaaggttatgtctcaatcctgattgaagagcttctgagaggagttctttga 420
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 ttgtctctgcaaggttatgtctcaatcctgattgaagagtttctgagaggagttctttga 620
Query: 421 gcccgttgttctaatggtctgacagccataaagcctcttcatgacacatgcccctctgcc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 621 gcccgttgttctaatggtctgacagccataaagcctcttcatgacacatgcctctctgcc 680
Query: 481 aggcggggtggatacagccttggacgttttccatgggcgctaactctcagacacagctca 540
|||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 681 aggcagggtggatacagcattggacattttccatgggcgctaactctcagacacagctca 740
Query: 541 tatgcctgcaacgttgcacttcactacctgagcctttt 578
||||||||||| ||||||||||||||||||||||||||
Sbjct: 741 tatgcctgcaaagttgcacttcactacctgagcctttt 778
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 578
Length of database: 978
Length adjustment: 10
Effective length of query: 568
Effective length of database: 968
Effective search space: 549824
Effective search space used: 549824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_h22.g1 MSMg01no236_h22.g1 CHROMAT_FILE:
MSMg01no236_h22.g1 PHD_FILE: MSMg01no236_h22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:04 2005
(342 letters)
>mm_chr10_67037114_67037855
Length = 742
Score = 619 bits (320), Expect = 0.0
Identities = 335/340 (98%), Gaps = 2/340 (0%)
Strand = Plus / Minus
Query: 4 tgtgggtgctagaaaccgaacctgggtctgctgcaagagcaatagaaacttttaaccaca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 tgtgggtgctagaaaccgaacctgggtctgctgcaagagcaatagaaacttttaaccaca 672
Query: 64 gagccatctctccagggcccatgtcatttgtcttgagacaagctctctctgtgtaatgga 123
||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||
Sbjct: 671 gagccatctctccagggcccatgtcgtttgtcttgagacgagctctctctgtgtaatgga 612
Query: 124 tgtcagccactggctgtcggtcctcctgcttcagcttcccaattacagacaagcaccaca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tgtcagccactggctgtcggtcctcctgcttcagcttcccaattacagacaagcaccaca 552
Query: 184 ggctcagctccgttgcttccttttaagt-atgatggccgatgcctggcatgttgtaggcc 242
|||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||
Sbjct: 551 ggctcagctccgttgcttccttttaagtca-gatggccgatgcctggcatgttgtaggcc 493
Query: 243 ttccaactgttgctactactccttagtcaaatgagggtctcttcattcagggaaagcaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ttccaactgttgctactactccttagtcaaatgagggtctcttcattcagggaaagcaaa 433
Query: 303 agctgctattctgtgttctccctgggcaacattatcaact 342
|||||||||||||||||||||||||| |||||||||||||
Sbjct: 432 agctgctattctgtgttctccctgggaaacattatcaact 393
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
