Query= MSMg01no236_p18.b1 MSMg01no236_p18.b1 CHROMAT_FILE:
MSMg01no236_p18.b1 PHD_FILE: MSMg01no236_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:41 2005
(293 letters)
>mm_chr10_102656753_102657448
Length = 696
Score = 505 bits (261), Expect = e-147
Identities = 288/301 (95%), Gaps = 8/301 (2%)
Strand = Plus / Minus
Query: 1 tctattgggttttatttcaatcttttgaaagagaatttgagtgttttgttgttgccgttg 60
||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 354 tctattgggttatatttcaatcttttgaaagagaatttgagtgttttgttgttgttgttg 295
Query: 61 ---ttgctgctgtttgttttggttttgatagggaaaaagaactatttgctattttgacta 117
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ttattgttgctgtttgttttggttttgatagggaaaaagaactatttgctattttgacta 235
Query: 118 ggaaagtaaaattttcttccaagcattgaagtactgtctcagctccatttcctgtctgag 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ggaaagtaaaattttcttccaagcattgaagtactgtctcagctccatttcctgtctgag 175
Query: 178 tgaaaag-----aaaaaaaaaaacccactctgacaaacagacattaatagagaaatagtt 232
||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 174 tgaaaagaaaaaaaaaaaaaaaacccactctgacaaacagacattaaaagagaaatagtt 115
Query: 233 tatctgcataattattccatcattgcaaggaggttagggcagtggtaacttgaagcagtt 292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 tatctgcataattattccatcattgcaaggaggttagggcagtggtaacttgaagcagtt 55
Query: 293 g 293
|
Sbjct: 54 g 54
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 696
Length adjustment: 9
Effective length of query: 284
Effective length of database: 687
Effective search space: 195108
Effective search space used: 195108
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no236_p18.g1 MSMg01no236_p18.g1 CHROMAT_FILE:
MSMg01no236_p18.g1 PHD_FILE: MSMg01no236_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:41 2005
(342 letters)
>mm_chr10_102513471_102514212
Length = 742
Score = 661 bits (342), Expect = 0.0
Identities = 342/342 (100%)
Strand = Plus / Plus
Query: 1 agaatctttttaagagacaatatgcagtgttttccaacttctagtatatgtttgttgaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaatctttttaagagacaatatgcagtgttttccaacttctagtatatgtttgttgaat 260
Query: 61 taattatcctttatcattccctgtgtcctctttctggacagacacacaaaaatggctaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taattatcctttatcattccctgtgtcctctttctggacagacacacaaaaatggctaga 320
Query: 121 atatgtagcaaacaaagggcgctaaagtcttgttctgttccgatatattctctcactatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atatgtagcaaacaaagggcgctaaagtcttgttctgttccgatatattctctcactatt 380
Query: 181 gttcatcttaatctttttcctccaggagtattttgactgtggtgttttgatttggctaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttcatcttaatctttttcctccaggagtattttgactgtggtgttttgatttggctaat 440
Query: 241 aaaatctgaacactgtgtgatttgtttcagaaatagcctgctaccctcctatacagctcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaaatctgaacactgtgtgatttgtttcagaaatagcctgctaccctcctatacagctcc 500
Query: 301 aggttacccagaacccttccttctattggtaattgtttttca 342
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggttacccagaacccttccttctattggtaattgtttttca 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 742
Length adjustment: 9
Effective length of query: 333
Effective length of database: 733
Effective search space: 244089
Effective search space used: 244089
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
