Query= MSMg01no260_f17.b1 MSMg01no260_f17.b1 CHROMAT_FILE:
MSMg01no260_f17.b1 PHD_FILE: MSMg01no260_f17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:25 2005
(673 letters)
>mm_chr10_24980283_24981355
Length = 1073
Score = 1112 bits (575), Expect = 0.0
Identities = 649/679 (95%), Gaps = 13/679 (1%)
Strand = Plus / Plus
Query: 5 gaattcctttaaaaccacatctagagactgtggatagaattcaatgtcaggaatatactt 64
||||||||||||||||| ||||||||||||||||| ||||||| || |||||||||||||
Sbjct: 205 gaattcctttaaaaccaaatctagagactgtggatggaattcagtgccaggaatatactt 264
Query: 65 gtaatggccaaggccctgcgttcaacccccgacgccaaaatgtaatccaatgaacaaaag 124
|||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 265 gtaatggcaaaggccctgcgttcaacccctgacgccaaaatgtaatccagtgaacaaaag 324
Query: 125 aaataaaatactaaaacttgtctacattcagactac-ctgaatactccatggacggcgga 183
||||||||||||||||||||||||||||| |||||| | |||||||||||||| ||| ||
Sbjct: 325 aaataaaatactaaaacttgtctacattctgactacgc-gaatactccatggatggcaga 383
Query: 184 agcaacccgactccagtgcctgttgttctcagggcagtgcctgatcactaagagctggca 243
|||||| ||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 384 agcaacttgactccagtgcctgttgttctcagggcagtgcctgatcactaacagctgaca 443
Query: 244 tcgtagcacgcacacacaatgtcagcagttggaagctaagacaggaggtccacttcgagc 303
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcgtagcacgcacaca--atgtcagcagttggaagctaagacaggaggtccacttcgagc 501
Query: 304 tcacggccagcccgggctacacagtaccaggcagggctacagaacaaaaccttttctcaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 tcacggccagcccgggctacacagtaccaggcagggctacagaacaaaaccttttctcaa 561
Query: 364 aacaacaacataaataaataaataaaatcttctgcttcaatgcgtaaataaatgaaaatc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aacaacaacataaataaataaataaaatcttctgcttcaatgcgtaaataaatgaaaatc 621
Query: 424 tcccatgactattagtatgtctggatttcttgtgagcacactggaaaaatacaaagaaaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tcccatgactattagtatgtctggatttcttgtgagcacactggaaaaatacaaagaaaa 681
Query: 484 gcaacagtataatacatgacaggtggaaagtaagcttaacagctggtgatgttttccctc 543
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 682 gcaacagtataatacatgacaggtggaaagtaagcttaacagctggtgatattttccctc 741
Query: 544 cgatttctattttttgtattgttttaatgaaattttcagaatataaatactcctagtaca 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 cgatttctattttttgtattgttttaatgaaattttcagaatataaatactcctagtaca 801
Query: 604 actggaataagaaaaggaattacagg---aat------tgctaaaatgacgaatgagcat 654
|||||||||||||||||||||||||| | | ||||||||||||||||||||||
Sbjct: 802 actggaataagaaaaggaattacaggggcagtggcctgtgctaaaatgacgaatgagcat 861
Query: 655 gcgcaggctcttgcagggg 673
| |||||||||||||||||
Sbjct: 862 gtgcaggctcttgcagggg 880
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no260_f17.g1 MSMg01no260_f17.g1 CHROMAT_FILE:
MSMg01no260_f17.g1 PHD_FILE: MSMg01no260_f17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:56:26 2005
(638 letters)
>mm_chr10_25101258_25102295
Length = 1038
Score = 1071 bits (554), Expect = 0.0
Identities = 589/606 (97%), Gaps = 12/606 (1%)
Strand = Plus / Minus
Query: 42 aaaaaaaaaaaaaaaaaaaaggca-------acccaaaaaaaaaaaatcttaaatcagtg 94
|||||||||||||||||||| ||| ||| |||||||||||||||||||||||
Sbjct: 1025 aaaaaaaaaaaaaaaaaaaa-gcaccccccccccc--aaaaaaaaaatcttaaatcagtg 969
Query: 95 acaatactcaagaa--aagcagactgcttctggttagctttccactgctgtgacaatacc 152
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 968 acaatactcaagaaggaagcagactgcttctggttagctttccactgctgtgacaatacc 909
Query: 153 tgagacaaactaacttgtaaggatgaaagcttaattttggcacacaggttcaatcaaagg 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 tgagacaaactaacttgtaaggatgaaagcttaattttggcacacaggttcaatcaaagg 849
Query: 213 tttcggtccacagtgagtctgcgccaccattcctacgcccacaatagagctcatggtagt 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 tttcggtccacagtgagtctgcgccaccattcctacgcccacaatagagctcatggtagt 789
Query: 273 tgacagagtgaagtccagcaaggctgcttaccccaggcagccaggggcacagaggaggcc 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 tgacagagtgaagtccagcaaggctgcttaccccaggcagccaggggcacagaggaggcc 729
Query: 333 gagattcccagcatgcctgcaagagtaacccctcccaggacgcaacttgcttctgaaggt 392
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 728 gagattcccagcatgcctgcaagagtaacccctcccaggacgcaacttgcttccgcaggt 669
Query: 393 cccacagcctgaccactctcccctcctcccacatgccgcaggctgtagaaatcgcttgaa 452
|||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||
Sbjct: 668 cccacagcctgaccactcccccctcctcccacaggccgcaggctgtagaaatcgcttgaa 609
Query: 453 catctggcaacatttaaagcccaaaactttttctattagtacagaaaaaaagaaacgggt 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 catctggcaacatttaaagcccaaaactttttctattagtacagaaaaaaagaaacgggt 549
Query: 513 ctaactattaagcccccttccgaaatgcaataaagcaaaaaaaattaaaacatttaccca 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 ctaactattaagcccccttccgaaatgcaataaagcaaaaaaaattaaaacatttaccca 489
Query: 573 gtgtttcctattttaaaactattttatggtaaacaacgagcccgcattgataaaggaaag 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gtgtttcctattttaaaactattttatggtaaacaacgagcccgcattgataaaggaaag 429
Query: 633 ccactt 638
||||||
Sbjct: 428 ccactt 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 68
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1038
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1028
Effective search space: 645584
Effective search space used: 645584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
