Query= MSMg01no262_a06.b1 MSMg01no262_a06.b1 CHROMAT_FILE:
MSMg01no262_a06.b1 PHD_FILE: MSMg01no262_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:32 2005
(482 letters)
>mm_chr10_114980631_114981513
Length = 883
Score = 841 bits (435), Expect = 0.0
Identities = 468/479 (97%), Gaps = 1/479 (0%)
Strand = Plus / Minus
Query: 4 ggaattcataattattctatatctgttccctcttctgcttagcaatccctaccattgggg 63
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 682 ggaattcataattattctacgtctgttccctcttctgcttagcaatccctaccattgggg 623
Query: 64 cacgttcagtcagcatgaaaaccacatatcccaagatcctatcccagcaaatgtgctagg 123
||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 622 cacattcagtcagcatgaaaaccacatatcccaagatcctatcccaacaaatgtgctagg 563
Query: 124 tgattaagttttggacaagagactagagtta-ggggtcctttgtaacttcatgttctcta 182
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 562 tgattaagttttggacaagagactagagttagggggtcctatgtaacttcatgttctcta 503
Query: 183 agtatagaacatcttgccttgcacttcttgcttgttgagtagaaaacgtcaacaaatgat 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 agtatagaacatcttgccttgcacttcttgcttgttgagtagaaaacgtcaacaaatgat 443
Query: 243 gtaatctcgcagataatagcgaagcaacacagaaacctgaagctccccagagttcctcat 302
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 442 gtaatctcgcagataatagcgaagcaacacagaaacctgaagctccccagaggtcctcat 383
Query: 303 tcacagcaaagcagactgactaggccactcaacagaacacttttgtaaatatgggactaa 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tcacagcaaagcagactgactaggccactcaacagaacacttttgtaaatatgggactaa 323
Query: 363 cacgtgaaacaaaaacaaccagtcgtctttaagctactatatcttggggtattttgggta 422
||||||||| |||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cacgtgaaagaaaaacaaactgtcgtctttaagctactatatcttggggtattttgggta 263
Query: 423 cagaaacttaatctgacgaacactctttctaaatttttgtgctataattcttttcagag 481
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 caaaaacttaatctgacgaacactctttctaaatttttgtgctataattcttttcagag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 883
Length adjustment: 10
Effective length of query: 472
Effective length of database: 873
Effective search space: 412056
Effective search space used: 412056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_a06.g1 MSMg01no262_a06.g1 CHROMAT_FILE:
MSMg01no262_a06.g1 PHD_FILE: MSMg01no262_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:33 2005
(667 letters)
>mm_chr10_114807506_114808572
Length = 1067
Score = 1212 bits (627), Expect = 0.0
Identities = 660/675 (97%), Gaps = 8/675 (1%)
Strand = Plus / Plus
Query: 1 aaattccatctctgtgtaggaaag-------gtcacgtgtgatcaggcatgttacgttca 53
|||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 193 aaattccatctctgtgtaggaaaggtttacagtcacgtgtgatcaggcatgttatgttca 252
Query: 54 tatggtaagctcacaaacttgaagaagaactacataacttatgtgaatacacttttactt 113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 tatggtaagctcacaaacttgaagaagaactacataacttatgtgaatacacttttactt 312
Query: 114 acttagccacagctttttgaaggaagggctcttattttgaagggagggctcttattagac 173
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 acttagccacagctttttgaaggaagggctcttattttgaagggagggctcttattagac 372
Query: 174 ttttagtgacacaaggccttttcaaggtgcaagtggtgccagaagaacgattttgctatt 233
||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 373 ttttagtgacacaaggccttttcaaggtgcaagtggttccagaagagcgattttgctatt 432
Query: 234 tctattttataaatatcagcatttgcatagctttatcacagagacacacattattttaga 293
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 tctattttataaatatcagcatttgcatagctttatcacagagacacacattattttaga 492
Query: 294 ggactgtattttatttccattatgaattaaagttgtttcaattttccaaaaaaagggggg 353
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 493 ggactgtattttatttccattatgaattaaagttgtttcaattatccaaaaaaagggggg 552
Query: 354 g-aggggttaaaaagcaagctgatggagtaagataaactgagcctgttttaacttgacac 412
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 ggaggggttaaaaagcaagctgatggagtaagataaactgagcctgttttaacttgacac 612
Query: 413 tattgggtttcacacccaggacaagtggcggaggtgcatagttagcgtaccaaagtgcac 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 613 tattgggtttcacacccaggacaagtggcggaggtgcatagttagcgtaccaaagtggac 672
Query: 473 ctgggctccaggtcctctcagctcccccaggccctacctggtacagggcatggatgccat 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ctgggctccaggtcctctcagctcccccaggccctacctggtacagggcatggatgccat 732
Query: 533 accccgccctctatgctgaacttcccaaccttaaaacaccttcttagatcctcagacact 592
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 accccgccctctatgctgaacttcccaaccttaaaacaccttcttagatcctcagacact 792
Query: 593 ttcttagaagctttcccatcctcagacatggatatgcagcagccagacctgggtctaaaa 652
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 793 ttcttagaagctttcccatcctcagacatggatatgcagcagccagacctgggtctgaaa 852
Query: 653 cacaatatagttatg 667
||||||||||||||
Sbjct: 853 tacaatatagttatg 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
