Query= MSMg01no262_h21.b1 MSMg01no262_h21.b1 CHROMAT_FILE:
MSMg01no262_h21.b1 PHD_FILE: MSMg01no262_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:09 2005
(657 letters)
>mm_chr10_123658579_123659640
Length = 1062
Score = 1164 bits (602), Expect = 0.0
Identities = 638/656 (97%), Gaps = 11/656 (1%)
Strand = Plus / Minus
Query: 13 tgtcttattacagaggggattcccaattgaccttggggaataaggcaaatgacaggaagt 72
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 tgtcttagtacagaggggattcccaattgaccttggggaataaggcaaatgacaggaagt 1003
Query: 73 gaagaataacaaaggcagaatttgtgtacagggcactgatttagaggcatctgtaacaca 132
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 gaagaataacaaaggcagaatttgtgtacagggcactgatttagaggcatctgtaacaca 943
Query: 133 ttgttgtccccagaggttctaatcattcacttccttagagttgttgtgtgctctcaaaat 192
||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||
Sbjct: 942 ttgttgtccccagaggttctaatcattcacttcctgagaattgttgtgggctctcaaaat 883
Query: 193 tttagaatcctgga------tttttttttttgaagtaaagaaaactgagctaacatcctg 246
|||||||||||||| ||||||||||||||||||||||||||||||||||| ||||
Sbjct: 882 tttagaatcctggatttttttttttttttttgaagtaaagaaaactgagctaacagcctg 823
Query: 247 acaagagactcagttaaggcggcacttaggagtcacacatttaccaagcactctcaaggc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 acaagagactcagttaaggcggcacttaggagtcacacatttaccaagcactctcaaggc 763
Query: 307 taggcaatgtgctgcatgttgcaaggagaggcagagatgaatggaatagact-----tct 361
||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 762 taggcaatgtgctgcatgttgcaaggagaggcagatatgaatggaatagacttcctgtct 703
Query: 362 tctaagtgtggcgagctatgttcacaaatagctgtaatctgaagcaatataaggaaagct 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tctaagtgtggcgagctatgttcacaaatagctgtaatctgaagcaatataaggaaagct 643
Query: 422 atgtaagtactctaaagtgttctgtgagtaaaagaagaggcacaattttgataagtagag 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 atgtaagtactctaaagtgttctgtgagtaaaagaagaggcacaattttgataagtagag 583
Query: 482 atgtggagagaagagtaccatagcatttgagcaaagagcaaagctgggaaagctcaaaga 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 atgtggagagaagagtaccatagcatttgagcaaagagcaaagctgggaaagctcaaaga 523
Query: 542 ttattgataaatagctagggaatcagtttatgtttccaacagagagcttaaatggtccac 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ttattgataaatagctagggaatcagtttatgtttccaacagagagcttaaatggtccac 463
Query: 602 aatcagtcagctgccttctgactacaccacattaatttaacttatgattttttccc 657
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 462 aatcagtcagctgccttctgactacaccacattaatttaatttatgattttttccc 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1062
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1052
Effective search space: 680644
Effective search space used: 680644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_h21.g1 MSMg01no262_h21.g1 CHROMAT_FILE:
MSMg01no262_h21.g1 PHD_FILE: MSMg01no262_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:09 2005
(656 letters)
>mm_chr10_123548086_123549138
Length = 1053
Score = 1245 bits (644), Expect = 0.0
Identities = 652/656 (99%), Gaps = 3/656 (0%)
Strand = Plus / Plus
Query: 1 tattagtaaggcaaggtgtttattactgtgatcaatcattcatactcaatatcaaagagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tattagtaaggcaaggtgtttattactgtgatcaatcattcatactcaatatcaaagagt 260
Query: 61 agagtcaatagccaagatacagctttatgaaggcttaaatctcaactaattccttcttag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagtcaatagccaagatacagctttatgaaggcttaaatctcaactaattccttcttag 320
Query: 121 caagtgaggctctctggagaccagactacgtctaccttaaaaagtctgaggtgccagctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caagtgaggctctctggagaccagactacgtctaccttaaaaagtctgaggtgccagctt 380
Query: 181 attatacaccacagacaaactgtccactctttgctcttattaaaatatgacattcatgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attatacaccacagacaaactgtccactctttgctcttattaaaatatgacattcatgtg 440
Query: 241 tatgacctgtattttcaagtgatttcatgagaaatttgcatgctttttaaaagtagaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatgacctgtattttcaagtgatttcatgagaaatttgcatgctttttaaaagtagaa-- 498
Query: 301 aatttgaaaaataaaaacctataaagttatataaagcatacttttataatgcattcagtg 360
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 499 -atttgaaaaataaaaacctataaagttatataaagcatacttttataatgtattcagtg 557
Query: 361 ttgaggtctagaagttgccccaacaaccacatgaacactgatttcagtcagacagggatg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttgaggtctagaagttgccccaacaaccacatgaacactgatttcagtcagacagggatg 617
Query: 421 gtttatcgaacatacaactaaagactgattggccagggaaactcctcaggcttagagtta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 gtttatcgaacatacaactaaagactgattggccagggaaactcctcaggcttagagtta 677
Query: 481 aaaatctacttgctggacatttctcaggccaagttgatcacaaagtcaataatgagcaca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 aaaatctacttgctggacatttctcaggccaagttgatcacaaagtcaataatgagcaca 737
Query: 541 cacacaggtgcaggaagtgctacctgacggtcagccctgactcgagccatttcagacata 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 cacacaggtgcaggaagtgctacctgacggtcagccctgactcgagccatttcagacata 797
Query: 601 atggttcatactgacctttaatttgatgggtcctacctgaagcttatagttgtgaa 656
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 atggttcatactgacctttaatttgatgggtcctacctgaagcttatagttgtgaa 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 656
Length of database: 1053
Length adjustment: 10
Effective length of query: 646
Effective length of database: 1043
Effective search space: 673778
Effective search space used: 673778
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
