Query= MSMg01no262_m13.b1 MSMg01no262_m13.b1 CHROMAT_FILE:
MSMg01no262_m13.b1 PHD_FILE: MSMg01no262_m13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:31 2005
(322 letters)
>mm_chr10_68110193_68110914
Length = 722
Score = 538 bits (278), Expect = e-157
Identities = 305/318 (95%), Gaps = 8/318 (2%)
Strand = Plus / Plus
Query: 5 gaattctctatgtccttcacagaaagtgagtggcaacttgagcaataaggtcttacaatc 64
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 gaattctc--tctccttcacagaaagtgagtggcaacttgagcaataaggtcttacaatc 270
Query: 65 tagtaatggcagataacgacaatagtccatattattttggggggacctatggaacctccc 124
|||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 271 tagtaatggcagataatgacaatagtccatattattttggggagacctatggaacctccc 330
Query: 125 tgatcagcattttagagagaaaataaaaaggcttgaagattatgagcattgaaagagaaa 184
||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 331 tgatcagcattttagagagaaaataaaaaggcttgaagact------attgaaagagaaa 384
Query: 185 gagctgaagaatttaggatattatttttggtggtgatgttttatgcctgatgcctaggct 244
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gagttgaagaatttaggatattatttttggtggtgatgttttatgcctgatgcctaggct 444
Query: 245 gcattgtggaagctgggtggtaggaataccatgttattctttattctagtgattatggtg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gcattgtggaagctgggtggtaggaataccatgttattctttattctagtgattatggtg 504
Query: 305 aacattttctgtaataaa 322
||||||||||||||||||
Sbjct: 505 aacattttctgtaataaa 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_m13.g1 MSMg01no262_m13.g1 CHROMAT_FILE:
MSMg01no262_m13.g1 PHD_FILE: MSMg01no262_m13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:31 2005
(119 letters)
>mm_chr10_68310368_68310887
Length = 520
Score = 217 bits (112), Expect = 2e-61
Identities = 118/120 (98%), Gaps = 1/120 (0%)
Strand = Plus / Minus
Query: 1 agtcagaacttctcatctggtttttctctcatttac-aaatgacatggttgacaggaaaa 59
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 320 agtcagaacttctcatctggtttttctctcatttacaaaatgacatggttgacaggaaaa 261
Query: 60 gatggtaccttagtgagtgacagttgagaatggagaggagtagggagtgaatttggggtc 119
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gatggtaccttagtgagcgacagttgagaatggagaggagtagggagtgaatttggggtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 119
Length of database: 520
Length adjustment: 8
Effective length of query: 111
Effective length of database: 512
Effective search space: 56832
Effective search space used: 56832
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
