Query= MSMg01no263_p07.b1 MSMg01no263_p07.b1 CHROMAT_FILE:
MSMg01no263_p07.b1 PHD_FILE: MSMg01no263_p07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:01 2005
(315 letters)
>mm_chr10_85708023_85708737
Length = 715
Score = 569 bits (294), Expect = e-166
Identities = 309/318 (97%), Gaps = 7/318 (2%)
Strand = Plus / Minus
Query: 5 gaattccaaccccaagatgttatctgaagtgctactagacagaaactgtaaatcacaaga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gaattccaaccccaagatgttatctgaagtgctactagacagaaactgtaaatcacaaga 395
Query: 65 tgactagtggcacagatgagaggcgtttgtttgcagtctgttctaagttctatacatagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tgactagtggcacagatgagaggcgtttgtttgcagtctgttctaagttctatacatagc 335
Query: 125 atggagctccatgcattctcacttagcatgtatgtacatacccacaacccagtgtgtatg 184
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 atggagctccgtgcattctcacttagcatgtatgtacatacccacaacccagtgtgtatg 275
Query: 185 tatgcccgtgtgcattcacatgagtgcatgtgattgtggaggttggagaacaaccttgac 244
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 274 tatgcccgtgtgcattcacatgagtgcatgtgattgtggaggttggaggacaaccttgac 215
Query: 245 ccttgaccct-------caagagctactcacgttatttgttccttttcccaccttgtttc 297
|||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ccttgacccttgaccctcaagagctactcacgttatttgttccttttcccaccttgtttc 155
Query: 298 cttgagacagggtttctc 315
||||||||||||||||||
Sbjct: 154 cttgagacagggtttctc 137
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_p07.g1 MSMg01no263_p07.g1 CHROMAT_FILE:
MSMg01no263_p07.g1 PHD_FILE: MSMg01no263_p07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:01 2005
(289 letters)
>mm_chr10_85560229_85560917
Length = 689
Score = 462 bits (239), Expect = e-135
Identities = 275/291 (94%), Gaps = 8/291 (2%)
Strand = Plus / Plus
Query: 3 ggtcatgcttgactatgctctgagtttaaggtcagtcagggttaccccc----gacccta 58
||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 203 ggtcatgcttgactatgctctgagtttaaggtcagtcagggctac----aagagacccta 258
Query: 59 tttctagtataaaagtagttgaggaacggtccctgtccctgaggagctcatagcctgtat 118
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 259 tttctagtataaaagtagttgaggaacggtccctgtccctgaggaatttatagcctgtat 318
Query: 119 ggggtaggaccacagggggacagataactcagcagatggtgattagaaccactgaagtgc 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ggggtaggaccacagggggacagataactcagcagatggtgattagaaccactgaagtgc 378
Query: 179 agaggcaggatgctgggggcatgcaccacatagaccctgaaccccgcagaaagcttgcag 238
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 379 agaggcaggatgctgggggcatgcaccacatagaccccgaaccccgcagaaagcttgcag 438
Query: 239 ggggccatgttgaactcggctctcctagcaattccagagactaaactgttc 289
|||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 439 agggccatggtgaacttggctctcctagcaattccagagactaaactgttc 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
