Query= MSMg01no264_g24.b1 MSMg01no264_g24.b1 CHROMAT_FILE:
MSMg01no264_g24.b1 PHD_FILE: MSMg01no264_g24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:36 2005
(305 letters)
>mm_chr10_125956804_125957504
Length = 701
Score = 555 bits (287), Expect = e-162
Identities = 299/305 (98%), Gaps = 4/305 (1%)
Strand = Plus / Plus
Query: 1 agtggatgcccctgcagagctgggcgtattcagacagagctcatcggcaaaggctcttcc 60
|||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct: 201 agtggatgcccctgcagagctgggcgtatt----cagagctcataggcaaaggctcttcc 256
Query: 61 tccctggaaggttcttgaacaactgccaacatttacgccgagttccggggttctgttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tccctggaaggttcttgaacaactgccaacatttacgccgagttccggggttctgttctt 316
Query: 121 ctgctgcaggccaactgcagttccaaatgacaagttcttcctttagatatgttaatataa 180
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 317 ctgctgcaggccaactgcagttctaaatgacaagttcttcctttagatatgttaatataa 376
Query: 181 ctaattaggttataatctaggactccactcaaagccaatctcaaaagtgactttcatgtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ctaattaggttataatctaggactccactcaaagccaatctcaaaagtgactttcatgtc 436
Query: 241 tttgtcccagcctgctaggtgcaaaggggcactttttattcacctggtttccaagttctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tttgtcccagcctgctaggtgcaaaggggcactttttattcacctggtttccaagttctg 496
Query: 301 gagct 305
|||||
Sbjct: 497 gagct 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 305
Length of database: 701
Length adjustment: 9
Effective length of query: 296
Effective length of database: 692
Effective search space: 204832
Effective search space used: 204832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_g24.g1 MSMg01no264_g24.g1 CHROMAT_FILE:
MSMg01no264_g24.g1 PHD_FILE: MSMg01no264_g24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:37 2005
(287 letters)
>mm_chr10_126083861_126084547
Length = 687
Score = 551 bits (285), Expect = e-161
Identities = 285/285 (100%)
Strand = Plus / Minus
Query: 1 tggcttgggttgagttccaggcgcagctggtaagcgagtctgatcacatgacagagttgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tggcttgggttgagttccaggcgcagctggtaagcgagtctgatcacatgacagagttgc 426
Query: 61 cgcacccagtgttatccttgaagccactggctgctgacccatggagcggagcctatgtga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 cgcacccagtgttatccttgaagccactggctgctgacccatggagcggagcctatgtga 366
Query: 121 atagtttaccctggtttcttttctgtaatttccctcatccgggaatggaaggtgagggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atagtttaccctggtttcttttctgtaatttccctcatccgggaatggaaggtgagggag 306
Query: 181 gagaataaagtgagccacttatttgtcatcaaaattcaaaaaccctgcttctgtcctagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gagaataaagtgagccacttatttgtcatcaaaattcaaaaaccctgcttctgtcctagg 246
Query: 241 ctggagtcctggagaggagcggacagagctgccttcaggaggggt 285
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ctggagtcctggagaggagcggacagagctgccttcaggaggggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
