Query= MSMg01no265_g18.b1 MSMg01no265_g18.b1 CHROMAT_FILE:
MSMg01no265_g18.b1 PHD_FILE: MSMg01no265_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:53 2005
(320 letters)
>mm_chr10_52253767_52254486
Length = 720
Score = 598 bits (309), Expect = e-175
Identities = 312/313 (99%)
Strand = Plus / Plus
Query: 5 gaattccagtgttggctaataaaaattctttttcagttccttgcccacaacttcaatctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagtgttggctaataaaaattctttttcagttccttgcccacaacttcaatctg 264
Query: 65 tatgattgcaacgggaaaagagtagaaagccatctcctagaaaacgagatgtctgttgtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatgattgcaacgggaaaagagtagaaagccatctcctagaaaacgagatgtctgttgtt 324
Query: 125 caaggtctatgtgtgcagtggcttctaaatattcaaagcagaatttaaaacatgacattt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caaggtctatgtgtgcagtggcttctaaatattcaaagcagaatttaaaacatgacattt 384
Query: 185 atagagaatttcacacttacttcttatattaacgacatgtaatttgtttttgtcatgatt 244
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 385 atagagaatttcacacttactttttatattaacgacatgtaatttgtttttgtcatgatt 444
Query: 245 tatacatagcatttaaaatcaatcaatttttcatcacatgcaattgagttaaataataat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tatacatagcatttaaaatcaatcaatttttcatcacatgcaattgagttaaataataat 504
Query: 305 cacgaaaaaacaa 317
|||||||||||||
Sbjct: 505 cacgaaaaaacaa 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_g18.g1 MSMg01no265_g18.g1 CHROMAT_FILE:
MSMg01no265_g18.g1 PHD_FILE: MSMg01no265_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:02:54 2005
(284 letters)
>mm_chr10_52399526_52400209
Length = 684
Score = 522 bits (270), Expect = e-153
Identities = 283/292 (96%), Gaps = 8/292 (2%)
Strand = Plus / Minus
Query: 1 tgcagccaatgaagagaattgtgctgaatgatgccctgcaagggtgagtgagcccaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 tgcagccaatgaagagaattgtgctgaatgatgccctgcaagggtgagtgagcccaggca 394
Query: 61 ggataagaaggtagggacgcttgctttaggagaaagttgaggaaggtggaaaggcagcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggataagaaggtagggacgcttgctttaggagaaagttgaggaaggtggaaaggcagcaa 334
Query: 121 gggtttttctgaggacttgatctggtgttgatggtaggattttacctagtggagatgaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gggtttttctgaggacttgatctggtgttgatggtaggattttacctagtggagatgaga 274
Query: 181 agtcaggagtagacactcaaggctgagggaaccaagccaacaaagacttcaccacagcag 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 273 agtcaggagtagacactcaaggctgagggaaccaagccaacaaagacttcaccaaagcag 214
Query: 241 gtgcctgtgtgga--------ataggtaaatgaagctaattacagaagttta 284
||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 213 gtgcctgtgtggagtacgggaataggtaaatgaagctaattacagaagttta 162
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
