Query= MSMg01no266_l17.b1 MSMg01no266_l17.b1 CHROMAT_FILE:
MSMg01no266_l17.b1 PHD_FILE: MSMg01no266_l17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:35 2005
(293 letters)
>mm_chr10_86443204_86443896
Length = 693
Score = 549 bits (284), Expect = e-161
Identities = 290/292 (99%)
Strand = Plus / Minus
Query: 1 catctctcattcttatacccacctgtaaagcctgaagaaagatcagattgaccccctttg 60
||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||
Sbjct: 492 catctctcattcttatacccacctgtaaagcctgaagaaagatcagaatgaccctctttg 433
Query: 61 aagacataaaatggggtcacatagctaaagctaccttatgaatatgtttaaggacataag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 aagacataaaatggggtcacatagctaaagctaccttatgaatatgtttaaggacataag 373
Query: 121 ctgtcccttcttgctgttgttagtaatcatctctactactagactacctttggggtggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ctgtcccttcttgctgttgttagtaatcatctctactactagactacctttggggtggtg 313
Query: 181 ctctccaccctgggccaaccaggggcatggggccattgaagaaattctttatctaacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctctccaccctgggccaaccaggggcatggggccattgaagaaattctttatctaacaaa 253
Query: 241 aaggactcctgtcaatttcaaactgtagaggaattaaacacaggtccttctg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 aaggactcctgtcaatttcaaactgtagaggaattaaacacaggtccttctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no266_l17.g1 MSMg01no266_l17.g1 CHROMAT_FILE:
MSMg01no266_l17.g1 PHD_FILE: MSMg01no266_l17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:04:36 2005
(289 letters)
>mm_chr10_86291933_86292621
Length = 689
Score = 542 bits (280), Expect = e-158
Identities = 287/290 (98%), Gaps = 2/290 (0%)
Strand = Plus / Plus
Query: 1 agtgggcactgaatgaacacaggcacgcatgcatgcacacatgctcaagcacacacacac 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 199 agtgggcactgaatgaacacaggcacacatgcatgcacacatgctcaagcacacacacac 258
Query: 61 acacacacacacacacacacacacacacacacacacaca--tctcttccccttccccata 118
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 259 acacacacacacacacacacacacacacacacacacacacatctcttccccttccccata 318
Query: 119 ttttgcatgtctagaagttccttgaggtaccctatggattttagctctagagtctgtggt 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttttgcatgtctagaagttccttgaggtaccctatggattttagctctagagtctgtggt 378
Query: 179 gggtaatttgttaatgtaaaatgtggacaccagggctgtagagatggttcaggagttaag 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 gggtaatttgttaatgtaaaatgtggacaccagggctgtagagatggttcaggagttaag 438
Query: 239 agcactggctgttcttgcagaggtctcaggttaattcctagcacccacat 288
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 agcactggctgttcttgcagaggtctcaggttaattcctagcacccacat 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 24
Number of successful extensions: 24
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
