Query= MSMg01no267_m14.b1 MSMg01no267_m14.b1 CHROMAT_FILE:
MSMg01no267_m14.b1 PHD_FILE: MSMg01no267_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:56 2005
(311 letters)
>mm_chr10_115761620_115762331
Length = 712
Score = 557 bits (288), Expect = e-163
Identities = 303/308 (98%), Gaps = 1/308 (0%)
Strand = Plus / Plus
Query: 5 gaattcctgccgttcttgaca-tgtattgctccgtttgtttttatttttatccactatgt 63
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctgccgttcttgacaatgtattgctccgtttgtttttatttttatccactatgt 264
Query: 64 gagatatgtttattggggtgatttttcacggtaataacctaacatgctgctggaaatgaa 123
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 265 gagatatgtttattggggtgatttttcacggtaataacctagcatgctgctggaaatgaa 324
Query: 124 agcccggggcattgcttcagatgctaatattgtcatcccttctactgttcatactgtggg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agcccggggcattgcttcagatgctaatattgtcatcccttctactgttcatactgtggg 384
Query: 184 gtgatgtaggaagtgtagttagtatacagcatgtgtttaactttgtaaggaactgctggt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgatgtaggaagtgtagttagtatacagcatgtgtttaactttgtaaggaactgctggt 444
Query: 244 gtctttcctacagcaattaaaacatttactttcttatgttttgagatgcgattctcacta 303
|||||||||||||||||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 445 gtctttcctacagcaattaaaacatttactttcttatgttttgaaatggggttctcacta 504
Query: 304 ctgatgct 311
||||||||
Sbjct: 505 ctgatgct 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 712
Length adjustment: 9
Effective length of query: 302
Effective length of database: 703
Effective search space: 212306
Effective search space used: 212306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no267_m14.g1 MSMg01no267_m14.g1 CHROMAT_FILE:
MSMg01no267_m14.g1 PHD_FILE: MSMg01no267_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:05:56 2005
(333 letters)
>mm_chr10_115900494_115901226
Length = 733
Score = 644 bits (333), Expect = 0.0
Identities = 333/333 (100%)
Strand = Plus / Minus
Query: 1 gcattcaagcagcatcagcgccatctgtgggctggacagaaatgctcatgctctggtctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 gcattcaagcagcatcagcgccatctgtgggctggacagaaatgctcatgctctggtctc 467
Query: 61 agcctcgattccacccaagtcccatggtcaaatccaaccatagcgcatagaaaaaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 agcctcgattccacccaagtcccatggtcaaatccaaccatagcgcatagaaaaaaaaaa 407
Query: 121 gaaaaaaaaagatttataggctgctgtgtagttgcttgctaagcatgcacaagtcccgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gaaaaaaaaagatttataggctgctgtgtagttgcttgctaagcatgcacaagtcccgga 347
Query: 181 atccaaagacaagaaaggaatgtaaatctgtagaacaaaatttctaaataggaattaaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 atccaaagacaagaaaggaatgtaaatctgtagaacaaaatttctaaataggaattaaac 287
Query: 241 atgtttatgtgtatgtgtttaagaatatgtattaactgtaaatggaccaaataccccagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 atgtttatgtgtatgtgtttaagaatatgtattaactgtaaatggaccaaataccccagt 227
Query: 301 taaaagacagggattgtaattcaggaacatcaa 333
|||||||||||||||||||||||||||||||||
Sbjct: 226 taaaagacagggattgtaattcaggaacatcaa 194
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
