Query= MSMg01no268_g06.b1 MSMg01no268_g06.b1 CHROMAT_FILE:
MSMg01no268_g06.b1 PHD_FILE: MSMg01no268_g06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:40 2005
(317 letters)
>mm_chr10_126056875_126057591
Length = 717
Score = 574 bits (297), Expect = e-168
Identities = 306/309 (99%)
Strand = Plus / Minus
Query: 5 gaattcttgaatcctggcaaccggagctttcttacatcttgttctgttgctaatctgctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 513 gaattcttgaatcctggcaaccggagctttcttacatcttgttctgttgctaatctgctg 454
Query: 65 agaataccaatctctctgaggacactaattagaataataattaacacttataacaaagct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 453 agaataccaatctctctgaggacactaattagaataataattaacacttataacaaagct 394
Query: 125 cttccactccctgggcgtgtatctctcttgtgcagcccctcgcctcagatgtctgtgcgg 184
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 393 cttccactccctgggcgtgtatctctcttgcgcagcccctcgcctcagatgtctgtgcgg 334
Query: 185 cggctttgatctttatgcttgggggttctgggctgatccttcgggtaacagactacccct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 cggctttgatctttatgcttgggggttctgggctgatccttcgggtaacagactacccct 274
Query: 245 cctgtgtggttgcttggatcactctggttttcctcgcttctccggtgagaagtgtttagg 304
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 273 cctgtgtggttgcttggatcactctggttttcatcgcttctccagtgagaagtgtttagg 214
Query: 305 tttgtatat 313
|||||||||
Sbjct: 213 tttgtatat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no268_g06.g1 MSMg01no268_g06.g1 CHROMAT_FILE:
MSMg01no268_g06.g1 PHD_FILE: MSMg01no268_g06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:06:40 2005
(284 letters)
>mm_chr10_125899101_125899785
Length = 685
Score = 514 bits (266), Expect = e-150
Identities = 278/282 (98%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 3 caaaagccttccctggaagagccttttt-cagaaacttccacacaaactattagtatttt 61
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 203 caaaagccttccctggaagagccttttttcagaaacttccacacaaactattagtatttt 262
Query: 62 gtgagaaaacaaaatattcacagattacacctgggacttttaatcccggtgaacactgaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gtgagaaaacaaaatattcacagattacacctgggacttttaatcccggtgaacactgaa 322
Query: 122 gtaatacctcaaacctactaaaatgacataggctagactgaaataaacctgaatataaca 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtaatacctcaaacctactaaaatgacataggctagactgaaataaacctgaatataaca 382
Query: 182 gaatataaacacaagaaatagatggatactttaaaattgctcaacattttactttcaata 241
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 383 gaatataaacacaagaaatagatggatacttttaaattgctcaacattttactttcaata 442
Query: 242 gaagtatgcatttgggtagtatcaagtctgcattttccaaga 283
|||||| |||||| ||||||||||||||||||||||||||||
Sbjct: 443 gaagtaagcatttaggtagtatcaagtctgcattttccaaga 484
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 685
Length adjustment: 9
Effective length of query: 275
Effective length of database: 676
Effective search space: 185900
Effective search space used: 185900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
