Query= MSMg01no269_a04.b1 MSMg01no269_a04.b1 CHROMAT_FILE:
MSMg01no269_a04.b1 PHD_FILE: MSMg01no269_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:23 2005
(667 letters)
>mm_chr10_87833621_87834687
Length = 1067
Score = 1251 bits (647), Expect = 0.0
Identities = 659/663 (99%)
Strand = Plus / Plus
Query: 5 gaattctacatcttcatctgaaagatactagcagaatactgacttccaggctactaggat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctacatcttcatctgaaagatactagcagaatactgacttccaggctactaggat 264
Query: 65 gaggatcttaaagcacatgcccatagtgacacacctactccaacaaggccacacctgctc 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaggatcttaaagcacatgcccacagtgacacacctactccaacaaggccacacctgctc 324
Query: 125 caaaagggctacatctccaaagagtgccattccctgggccaaacatatacaaaccatcac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caaaagggctacatctccaaagagtgccattccctgggccaaacatatacaaaccatcac 384
Query: 185 acagtgaggtccctgagctgtgaatgagttctgagttttgttcccagatatgcagggaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acagtgaggtccctgagctgtgaatgagttctgagttttgttcccagatatgcagggaag 444
Query: 245 tcactcttcggtatagaaaatcaggaaatttcaataagtcacatgttttagggcaagata 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcactcttcggtatagaaaatcaggaaatttcaataagtcacatgttttagggcaagata 504
Query: 305 gagattacacagtgagattgattcttctggcctctacattacctgtgctcacttatttta 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gagattacacagtgagattgattcttctggcctctacattacctgtgctcacttatttta 564
Query: 365 tatatctacttccccctccccgcccccatgtggacttgtttctttttagaatgtccctct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatatctacttccccctccccgcccccatgtggacttgtttctttttagaatgtccctct 624
Query: 425 gcttccctttgttctttctcctctgtatagactcattcacggctgtgatcccatatgtgg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 gcttccctttgttctttctcctctgtatagactcattcacggctgtgatcccatatgtgg 684
Query: 485 agctacgctggatgcaggtgtttcttgaccatttacctcagaaatagccttcttcaggaa 544
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 agctatgctggatgcaggtgtttcttgaccatttacctcagaaatagccttcttcaggaa 744
Query: 545 ctcttccctaccaacccagatgtttgacctttgagccacttctttgcatcccagggctac 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctcttccctaccaacccagatgtttgacctttgagccacttctttgcatcccagggctac 804
Query: 605 tttatttctacttcatattccccagcgttgacatgttaccctatcaactgggttcaaaag 664
||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||
Sbjct: 805 tttatttctacttcatattccccggcgttgacatgttaccctaacaactgggttcaaaag 864
Query: 665 act 667
|||
Sbjct: 865 act 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 667
Length of database: 1067
Length adjustment: 10
Effective length of query: 657
Effective length of database: 1057
Effective search space: 694449
Effective search space used: 694449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no269_a04.g1 MSMg01no269_a04.g1 CHROMAT_FILE:
MSMg01no269_a04.g1 PHD_FILE: MSMg01no269_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:07:23 2005
(655 letters)
>mm_chr10_87974529_87975583
Length = 1055
Score = 687 bits (355), Expect = 0.0
Identities = 371/377 (98%), Gaps = 2/377 (0%)
Strand = Plus / Minus
Query: 1 tagaagagacctaggctgaggaagaaggtcagctgggtgctttctctctctgcctctcag 60
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 717 tagaagagacctaggctgaggaagaaggtcagctggatgctttctctctctgcctctcag 658
Query: 61 agctaacaggctttcatcccagcatttctcctgagtcttcattggtagaattgaatgatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 agctaacaggctttcatcccagcatttctcctgagtcttcattggtagaattgaatgatt 598
Query: 121 gagattttgtt--taaaaaaaaaacagaaacagaaacaaacaaacaaaaccatccaatcc 178
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 gagattttgttaaaaaaaaaaaaacagaaacagaaacaaacaaacaaaaccatccaatcc 538
Query: 179 catcaccatataaaattaactgccataccctgtcatgtactaattttatgtctattcctt 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 catcaccatataaaattaactgccataccctgtcatgtactaattttatgtctattcctt 478
Query: 239 ttgaaagatctggacagttctgctactcggttgaatttggcagaaagaaccccctgtact 298
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 477 ttgaaagatctggacagttctgctactcggttgaatttggcagaaaggaccccctgtact 418
Query: 299 ttctagaattttactctgggattctcaaggcatagacagtttcctccacaggtcagggag 358
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ttctagagttttactctgggattctcaaggcatagacagtttcctccacaggtcagggag 358
Query: 359 ggactctacagacccat 375
|||||||||||||||||
Sbjct: 357 ggactctacagacccat 341
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
