Query= MSMg01no269_l16.b1 MSMg01no269_l16.b1 CHROMAT_FILE:
MSMg01no269_l16.b1 PHD_FILE: MSMg01no269_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:15 2005
(615 letters)
>mm_chr10_84822672_84823686
Length = 1015
Score = 801 bits (414), Expect = 0.0
Identities = 426/430 (99%)
Strand = Plus / Minus
Query: 186 atcactttcttccttaattattcattttacatcctgacccaagcccccttcctcttctcc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 atcactttcttccttaattattcattttacatcctgacccaagcccccttcctcttctcc 956
Query: 246 cagtccctcccacagcacctcccctttcgaaacctcctcccccttttctctaagaagggg 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 cagtccctcccacagcacctcccctttcgaaacctcctcccccttttctctaagaagggg 896
Query: 306 gacgcacccctgggtatcaacccgccctggtacatcaagtcacagcaggactagacacat 365
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 895 gacgcacccctgggtatcaacccgccctggtacatcaagtcacagcaggactagacgcat 836
Query: 366 cctctcccactgaggcaccgtttttatgggtgcttaggaggtgtcaatccttgggctgca 425
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 cctctcccactgaggcaccatttttatgggtgcttaggaggtgtcaatccttgggctgca 776
Query: 426 ctctgtgatttggaaggtcttgtagagacacaaaaccttcccttctgggttcctttggtt 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ctctgtgatttggaaggtcttgtagagacacaaaaccttcccttctgggttcctttggtt 716
Query: 486 cctttggctatttttatcatgttgcttcatcaacttgccactcttcaaaagccttacacc 545
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 cctctggctatttttatcatgttgcttcatcaacttgccactcttcaaaagccttacacc 656
Query: 546 atgacagacaggagccaggtcttgtttgctgtccactgatgcagcctcagtatctctcat 605
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 655 atgacagacaggagccaggtcttgtttgctgtccactgatgcaccctcagtatctctcat 596
Query: 606 cctatccaga 615
||||||||||
Sbjct: 595 cctatccaga 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no269_l16.g1 MSMg01no269_l16.g1 CHROMAT_FILE:
MSMg01no269_l16.g1 PHD_FILE: MSMg01no269_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:15 2005
(602 letters)
>mm_chr10_84741784_84742785
Length = 1002
Score = 1141 bits (590), Expect = 0.0
Identities = 598/602 (99%), Gaps = 3/602 (0%)
Strand = Plus / Plus
Query: 1 aatttcaaaaacagcctcacaaggctggttaaacaaaaatccccattgaaaatcatggcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatttcaaaaacagcctcacaaggctggttaaacaaaaatccccattgaaaatcatggcc 260
Query: 61 cagccaaccaatcaagtcacctttagaagttagtaactttcagctgaccttggtggaagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagccaaccaatcaagtcacctttagaagttagtaactttcagctgaccttggtggaagc 320
Query: 121 cggaaccacagttataactctggcatttgactttgtttttttttttttttttttttaaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 cggaaccacagttataactctggcatttgactttgtttttttttttttttttt---aaga 377
Query: 181 tcaaactcctagagggtaagaaagccgctcttgctcgaaattaggaaccacctcctagtc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcaaactcctagagggtaagaaagccgctcttgctcgaaattaggaaccacctcctagtc 437
Query: 241 agacctctctttagaactgctgcaatatcttcccatctgattgacctgactttggtcccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 agacctctctttagaactgctgcaatatcttcccatctgattgacctgactttggtcccg 497
Query: 301 tctttcaaaaccaaagcctggataatttaatcaaagcagtttgctctggtcctgatcgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 tctttcaaaaccaaagcctggataatttaatcaaagcagtttgctctggtcctgatcgac 557
Query: 361 ttttcagaatagctgcctctggcttctgcaatgcgtcttggaaacatggactttcacact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 ttttcagaatagctgcctctggcttctgcaatgcgtcttggaaacatggactttcacact 617
Query: 421 cggccaagcgctgtctataaaaggaggctgcttagcaaggcaagagaccccttgcacggc 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 tggccaagcgctgtctataaaaggaggctgcttagcaaggcaagagaccccttgcacggc 677
Query: 481 ttccaagactttaatgtctttgccaagcttagggaatatcaaatcatagcccttagcttt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ttccaagactttaatgtctttgccaagcttagggaatatcaaatcatagcccttagcttt 737
Query: 541 acagactagaactctgaagcctgaagatgctgggagggaaggccctgagggatcgtacgg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 acagactagaactctgaagcctgaagatgctgggagggaaggccctgagggatcgtacgg 797
Query: 601 ct 602
||
Sbjct: 798 ct 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 602
Length of database: 1002
Length adjustment: 10
Effective length of query: 592
Effective length of database: 992
Effective search space: 587264
Effective search space used: 587264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
