Query= MSMg01no269_p20.b1 MSMg01no269_p20.b1 CHROMAT_FILE:
MSMg01no269_p20.b1 PHD_FILE: MSMg01no269_p20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:33 2005
(190 letters)
>mm_chr10_27002850_27003438
Length = 589
Score = 337 bits (174), Expect = 3e-97
Identities = 183/186 (98%), Gaps = 1/186 (0%)
Strand = Plus / Minus
Query: 5 gaattcctatcctttagatacaaacatttctttcttacttcagaattaaactaccttttc 64
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 gaattcccatcctttagatacaaacatttctttcttacttcagaattaaactaccttttc 330
Query: 65 ccaaagtcatacagtaaatacataaaaagtattccttcacaataattatcaaatgctatg 124
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 329 ccaaagtcatacagtaaatacataaaaagcattccttcacaataattatcaaatgctatg 270
Query: 125 catgttttagtataatgttgtagtttatttttatttgatatgacatgaaaaatgcttcat 184
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 269 catgttttagtataatgttgtagtttattttt-tttgatatgacatgaaaaatgcttcat 211
Query: 185 cagttg 190
||||||
Sbjct: 210 cagttg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 190
Length of database: 589
Length adjustment: 8
Effective length of query: 182
Effective length of database: 581
Effective search space: 105742
Effective search space used: 105742
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no269_p20.g1 MSMg01no269_p20.g1 CHROMAT_FILE:
MSMg01no269_p20.g1 PHD_FILE: MSMg01no269_p20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:08:33 2005
(301 letters)
>mm_chr10_26853453_26854154
Length = 702
Score = 561 bits (290), Expect = e-164
Identities = 299/302 (99%), Gaps = 1/302 (0%)
Strand = Plus / Plus
Query: 1 tggaaaaagttgtgaatcggaaagaagattt-agaacgtgagtgttgtttactttaactt 59
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 tggaaaaagttgtgaattggaaagaagatttcagaacgtgagtgttgtttactttaactt 260
Query: 60 gaaggtaacccggtccctaatgtgtgtgctttggggacagtcacagatttcccaactcac 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaggtaacccggtccctaatgtgtgtgctttggggacagtcacagatttcccaactcac 320
Query: 120 tctggttagaagctcatttgtttccatcacaagtgtgttcacgttgccctctgccaactg 179
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctggttagcagctcatttgtttccatcacaagtgtgttcacgttgccctctgccaactg 380
Query: 180 aatgagcctctctggtgcccgttgcggtgatagcaggtgctgtaaaagatttcagaccat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgagcctctctggtgcccgttgcggtgatagcaggtgctgtaaaagatttcagaccat 440
Query: 240 gtacatcttagtaaatggtttagcagtcatcctagggtcagacagagcacatttttgttc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtacatcttagtaaatggtttagcagtcatcctagggtcagacagagcacatttttgttc 500
Query: 300 ct 301
||
Sbjct: 501 ct 502
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 301
Length of database: 702
Length adjustment: 9
Effective length of query: 292
Effective length of database: 693
Effective search space: 202356
Effective search space used: 202356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
