Query= MSMg01no270_p15.b1 MSMg01no270_p15.b1 CHROMAT_FILE:
MSMg01no270_p15.b1 PHD_FILE: MSMg01no270_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:45 2005
(224 letters)
>mm_chr10_25935238_25935864
Length = 627
Score = 400 bits (207), Expect = e-116
Identities = 220/225 (97%), Gaps = 3/225 (1%)
Strand = Plus / Minus
Query: 1 agtactatcagatgtttacaatatagtgtgatgcatggttgtttgtctttcttgtatagt 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 425 agtactatcagatgtttacaatatagtgtgatgcatggttgtctgtctttcttgtatagt 366
Query: 61 atagttgtacggaagaatgctgacggtcaaaccactaaagtaaaatgcagatttacttac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 atagttgtacggaagaatgctgacggtcaaaccactaaagtaaaatgcagatttacttac 306
Query: 121 atagaattttggaagaggttctttctttaacaactttgagcccaccagaagaagatatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 atagaattttggaagaggttctttctttaacaactttgagcccaccagaagaagatatta 246
Query: 181 tattgagactggagtgtgtgtgtgtgt-gggg--ggggcgggttg 222
||||||||||||||||| ||||||||| |||| |||||||||||
Sbjct: 245 tattgagactggagtgtatgtgtgtgttggggttggggcgggttg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 627
Length adjustment: 9
Effective length of query: 215
Effective length of database: 618
Effective search space: 132870
Effective search space used: 132870
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no270_p15.g1 MSMg01no270_p15.g1 CHROMAT_FILE:
MSMg01no270_p15.g1 PHD_FILE: MSMg01no270_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:09:45 2005
(612 letters)
>mm_chr10_25814059_25815070
Length = 1012
Score = 1160 bits (600), Expect = 0.0
Identities = 609/612 (99%)
Strand = Plus / Plus
Query: 1 gtaagcaattaagttaaagagagcacaggaaatcctcagtgtgttaaggcaaatgagccc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtaagcaattaagttaaagagagcacaggaaatcctcagtgtgttaaggcaaatgagccc 260
Query: 61 aagtagtaccatatagagttgagcctttattttccatgtaattgtgaagatggaaatgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtagtaccatatagagttgagcctttattttccatgtaattgtgaagatggaaatgag 320
Query: 121 aattttatttctggaaatccatttcaaatctatggaataggaaacttaatagacaaaatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aattttatttctggaaatccatttcaaatctatggaataggaaacttaatagacaaaatc 380
Query: 181 atacgtgttagatgttaggtgttcctctctggggctagcaatcgtcctccacagagaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atacgtgttagatgttaggtgttcctctctggggctagcaatcgtcctccacagagaaaa 440
Query: 241 tacacagagccaagtaaaggctgtctcctcagcattgttaatggctacacaagtgtattg 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacacagagccaagtaaaggctgtctcctcagcattgttaatggctacacaagtgtattg 500
Query: 301 aagatttccaaaagctatgcttctctggtacatatcactctgcttctttctctattacta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aagatttccaaaagctatgcttctctggtacatatcactctgcttctttctctattacta 560
Query: 361 gattctccatctcaggcacttaagatgaagcagaaaggaaaggcagctgcctttctagct 420
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 561 gattctccatctcaggcacttaagatgaagcagaaaggaaaggcagcttcctttctagct 620
Query: 421 gacagtgggctgatactttcaaaggtgaaagggggctggagagatggcccagccattaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gacagtgggctgatactttcaaaggtgaaagggggctggagagatggcccagccattaaa 680
Query: 481 ggcgaggctcacaagcaaaagtaaaaggatgtgaagagtggaatcactacagcacaccca 540
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 681 ggcgaggctcacaagcaaaagtaaaaggatgtgaagagaggaatcactacagcacaccca 740
Query: 541 ttctttgcttttgtatcacaaaacaggaggcaatcgtggccgaacaagcaacttcctcca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttctttgcttttgtatcacaaaacaggaggcaatcgtggccgaacaagcaacttcctcca 800
Query: 601 accttatagatc 612
||||||||||||
Sbjct: 801 accttatagatc 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 612
Length of database: 1012
Length adjustment: 10
Effective length of query: 602
Effective length of database: 1002
Effective search space: 603204
Effective search space used: 603204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
