Query= MSMg01no271_e11.b1 MSMg01no271_e11.b1 CHROMAT_FILE:
MSMg01no271_e11.b1 PHD_FILE: MSMg01no271_e11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:07 2005
(702 letters)
>mm_chr10_113051120_113052221
Length = 1102
Score = 1243 bits (643), Expect = 0.0
Identities = 686/707 (97%), Gaps = 14/707 (1%)
Strand = Plus / Plus
Query: 8 gaattccctt-ttccaatctccccatcatctctgagagggtggagaacaccctaggaatc 66
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gaattcccttctcccaatctccccatcatctctgagagggtggagaacaccctaggaatc 257
Query: 67 cccccaccctgccatatcattatccttatacttctttccaccactacctctttacttcta 126
||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 258 cccccaccctggcatatcattatccttatacttctttccatcactacctctttacttcta 317
Query: 127 actttataacattcagattctgattattccaaggaattctctgccactcaaaatcaactt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 actttataacattcagattctgattattccaaggaattctctgccactcaaaatcaactt 377
Query: 187 ttaaaaatgtag-tttttttttcttctcaataatccactttccaaatatgaactcaattc 245
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 ttaaaaatgtagttttttttttcttctcaataatccactttccaaatatgaactcaattc 437
Query: 246 ctatgtctggaagagaaataacttgatcaactgattcactgaggttcaaaatagtacagc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ctatgtctggaagagaaataacttgatcaactgattcactgaggttcaaaatagtacagc 497
Query: 306 aatagggcaccctctccagcctgttgtctccacttaagcctctctgctcctctttgattg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aatagggcaccctctccagcctgttgtctccacttaagcctctctgctcctctttgattg 557
Query: 366 cttgttcttttagtgaacttgttttaattagatattgaaggtgacgcattctgccttttc 425
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 cttgttcttttagtgaatttgttttaattagatattgaaggtgacgcattctgccttttc 617
Query: 426 tcctgatgccaggtatgtaataaaacatacatataatatatgtaaatacacacacacaca 485
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 618 tcctgatgccaggtatgtaataaaacatacatataatatatgtaaat--acacacacaca 675
Query: 486 cacgcacacgcacacacacacacagaca----------aattatttatatatacaaattc 535
|||||||||||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 676 cacgcacacgcacacacacacacacacacacacaggcaaattatttatatatacaaattc 735
Query: 536 ctgttcagttgaacaataggtgccaggtaaatatatacaaactcagaaaggattatgttg 595
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 736 ctgttcagttgaacaataggtgccaggtaaatatatacaaactcagaaagaattatgttg 795
Query: 596 attgtagacgctaatcaatatttgacagtagtctgtcatcgtcattaaggggtttttggt 655
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 attgtagacgctaatcaatatttgacagtagtctgtcatcgtcattaaggggtttttggt 855
Query: 656 tgtgggtggtgacagtttttaaattttctttccaattctctgtcaat 702
||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 856 tgtgggtggtgacagtttttaaattctctttccaattctctgtcaat 902
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 702
Length of database: 1102
Length adjustment: 10
Effective length of query: 692
Effective length of database: 1092
Effective search space: 755664
Effective search space used: 755664
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no271_e11.g1 MSMg01no271_e11.g1 CHROMAT_FILE:
MSMg01no271_e11.g1 PHD_FILE: MSMg01no271_e11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:10:07 2005
(525 letters)
>mm_chr10_113143544_113144470
Length = 927
Score = 922 bits (477), Expect = 0.0
Identities = 514/527 (97%), Gaps = 4/527 (0%)
Strand = Plus / Minus
Query: 1 taagctctatgttttaaaaattcgcaaatatacagacaaaa-tttctccacctaagtgag 59
|||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||
Sbjct: 726 taagctctatgttttaaaaatttgcaaatatacagacaaaactttctccacctaagtgag 667
Query: 60 atatgtgcttcataattcatggattttggcttggaaggaaatgaaaaacgcagcaataag 119
||| ||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 666 ataggtgcttcataactcatgcattttggcttggaaggaaatgaaaaatgcagcaataag 607
Query: 120 aagttcctggtggtataggtaaaaagctggtagtagtttataacagaaaacatgagttac 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 aagttcctggtggtataggtaaaaagctggtagtagtttataacagaaaacatgagttac 547
Query: 180 ataaaaaa--atataatttgattgaaataggtagtattagagttgtatattttacaaata 237
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 ataaaaaaatatataatttgattgaaataggtagtattagagttgtatattttacaaata 487
Query: 238 taagtctattgtaaatttgaaaaggaagacatgtactgactccatttaaccaaataggga 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 taagtctattgtaaatttgaaaaggaagacatgtactgactccatttaaccaaataggga 427
Query: 298 ggtttgcatacatgtatccattaataatcacaataccccttgggaaaatccactgatcat 357
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 426 ggtttgcatacatgtatccattaataatcacaagaccccttgggaaaatccactgatcat 367
Query: 358 tgtctagaataaattagttttttgaaatcataaagcaaattagtaatgggcacagtattt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tgtctagaataaattagttttttgaaatcataaagcaaattagtaatgggcacagtattt 307
Query: 418 gaactgagttttcacgcttaatggtttaatcctatgtaggcattaaaatcatgggagaca 477
|||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 306 gaactgagttttcacgcttaatggtttaatcctatgcatgcattaaaatcatgggagacg 247
Query: 478 atgataataggctaaaggtacagaattgacattgtttcatcagcttt 524
|||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 246 atgataataggctaaaggtacagaattgacattgtttcatca-cttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 927
Length adjustment: 10
Effective length of query: 515
Effective length of database: 917
Effective search space: 472255
Effective search space used: 472255
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
