Query= MSMg01no273_l09.b1 MSMg01no273_l09.b1 CHROMAT_FILE:
MSMg01no273_l09.b1 PHD_FILE: MSMg01no273_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:08 2005
(308 letters)
>mm_chr10_104580965_104581671
Length = 707
Score = 542 bits (280), Expect = e-158
Identities = 299/308 (97%), Gaps = 9/308 (2%)
Strand = Plus / Minus
Query: 5 gaattctcttaaatttgc---gagaaatacaggaaagaaataaagtcattgtaaatcatg 61
||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 478 gaattctcttaaa---gcagagagaaatacaggaaagaaataaagtcattgtaaatcatg 422
Query: 62 aacttggtttttcttcctctcatacagagtgaatttaattttagaatgcattagtaacag 121
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 421 aacttggtttttcttcct-t-atacagagtgaatttaattttagaatgcattagtaacag 364
Query: 122 atttcttaactttaaattttgcttctctagtcaagtttgtcatgctttcaattaaaaggt 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 atttcttaactttaaattttgcttctctagtcaagtttgtcatgctttcaattaaaaggt 304
Query: 182 agtaactcagcaggtggatttttt-ccccagctgtcagaattcttctaaaatatcatttg 240
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 303 agtaactcagcaggtggatttttttccccagctgtcagaattcttctaaaatatcatttg 244
Query: 241 gaactacttgactccaaagggacctgacaattagagtgatgtgtgtgtgtgtgtgtgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gaactacttgactccaaagggacctgacaattagagtgatgtgtgtgtgtgtgtgtgtgt 184
Query: 301 gtgtgtgt 308
||||||||
Sbjct: 183 gtgtgtgt 176
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 5
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 707
Length adjustment: 9
Effective length of query: 299
Effective length of database: 698
Effective search space: 208702
Effective search space used: 208702
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no273_l09.g1 MSMg01no273_l09.g1 CHROMAT_FILE:
MSMg01no273_l09.g1 PHD_FILE: MSMg01no273_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:08 2005
(289 letters)
>mm_chr10_104423994_104424682
Length = 689
Score = 495 bits (256), Expect = e-144
Identities = 280/288 (97%)
Strand = Plus / Plus
Query: 1 aattgaagagctgtagttatccacttggatatgagatccaccctcaaccacatctctaca 60
||||||||||| |||||||||||||||||| | |||||||||||||||| |||||||||
Sbjct: 201 aattgaagagcggtagttatccacttggatgggggatccaccctcaaccaaatctctaca 260
Query: 61 accaatctcaaggtctagagcttacaacctctgataaaaagaacatcatcacataccctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accaatctcaaggtctagagcttacaacctctgataaaaagaacatcatcacataccctg 320
Query: 121 tggcatccaggagtaatggaagaatggagtgacctcactgaggctgtaaatctgagtgat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 321 tggcatccaggagtaatggaagaatggagtgacctcactgaggctgtaaatctgagcggt 380
Query: 181 cacttcactttcacacctgtggcaccaggaaaatactgaggtctcaataaatttctgata 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacttcactttcacacctgtggcaccaggaaaatactgaggtctcaataaatttctgatg 440
Query: 241 tgtgatagattaatgaaggacaaatgctgaatcaaataatgtttagta 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgatagattaatgaaggacaaatgctgaatcaaataatgtttagta 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
