Query= MSMg01no274_a22.b1 MSMg01no274_a22.b1 CHROMAT_FILE:
MSMg01no274_a22.b1 PHD_FILE: MSMg01no274_a22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:33 2005
(387 letters)
>mm_chr10_10422629_10423414
Length = 786
Score = 731 bits (378), Expect = 0.0
Identities = 384/386 (99%), Gaps = 1/386 (0%)
Strand = Plus / Plus
Query: 1 atatgtttcatcctttggaacatcttaatctgattacaatatttgtataactgtgcatta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atatgtttcatcctttggaacatcttaatctgattacaatatttgtataactgtgcatta 260
Query: 61 gcaaataatatgtggaagcttttatattattaaatattgtgtttatggccttatgcttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcaaataatatgtggaagcttttatattattaaatattgtgtttatggccttatgcttca 320
Query: 121 tttttattcaacaatggcccttttcacagggtattacatgcatcaacaactagcttagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttttattcaacaatggcccttttcacagggtattacatgcatcaacaactagcttagta 380
Query: 181 cttaagctaaactgaataaatatgttctacaaacctatctactcttcagtgaatgtcagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttaagctaaactgaataaatatgttctacaaacctatctactcttcagtgaatgtcagt 440
Query: 241 ttaggttgtttcccatattttgctctttggagcaaaccctcttcagcaaatccccttgca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttaggttgtttcccatattttgctctttggagcaaaccctcttcagcaaatccccttgca 500
Query: 301 cacaaaagctgtgctttttacaggaggtagccagatgttgaactggtaagttggtttttt 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 501 cacaaaagctgtgctttttacaggaggtaaccagatgttgaactggtaagttg-tttttt 559
Query: 361 ttatggtaccgacattgtctggggag 386
||||||||||||||||||||||||||
Sbjct: 560 ttatggtaccgacattgtctggggag 585
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 786
Length adjustment: 9
Effective length of query: 378
Effective length of database: 777
Effective search space: 293706
Effective search space used: 293706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no274_a22.g1 MSMg01no274_a22.g1 CHROMAT_FILE:
MSMg01no274_a22.g1 PHD_FILE: MSMg01no274_a22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:13:33 2005
(325 letters)
>mm_chr10_10601735_10602458
Length = 724
Score = 571 bits (295), Expect = e-167
Identities = 301/303 (99%), Gaps = 1/303 (0%)
Strand = Plus / Minus
Query: 23 ttgctcagcctcctctcttatagaacccaagactaccagcccagagatggcaccacccac 82
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 724 ttgctcagcctcctctcttatagaacccaagactaccagcccagagatggcaccacccac 665
Query: 83 aaggggccgaaatttcccccttgatcactaattaagaaaatgccttacagttggatctca 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aaggggccgaaatttcccccttgatcactaattaagaaaatgccttacagttggatctca 605
Query: 143 tggaggcatttcctcaactgaagctcctttctctgtgataactccagctgtgtcaagttg 202
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 604 tggaggcatttcctcaactgaagctcctttctctgtgataactccagctgtgtcaagttg 545
Query: 203 acacaaaactagccagtgcaagtggtaagggagattattatcttccaataacacataatg 262
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 acacaaaactagccagtgcaagtggtaagggagattattatcttccaataacacataatg 485
Query: 263 gataagttttaaaaagcaccccagtttgtctaccaaacataaaattgtaggcattggggc 322
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 484 gataagttttaaaaagcaccccagtttgtctaccaaacat-acattgtaggcattggggc 426
Query: 323 ttc 325
|||
Sbjct: 425 ttc 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 325
Length of database: 724
Length adjustment: 9
Effective length of query: 316
Effective length of database: 715
Effective search space: 225940
Effective search space used: 225940
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
