Query= MSMg01no275_f01.b1 MSMg01no275_f01.b1 CHROMAT_FILE:
MSMg01no275_f01.b1 PHD_FILE: MSMg01no275_f01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:02 2005
(670 letters)
>mm_chr10_5025659_5026728
Length = 1070
Score = 1230 bits (636), Expect = 0.0
Identities = 660/676 (97%), Gaps = 14/676 (2%)
Strand = Plus / Plus
Query: 1 atttggtggactcagctattgagtttcatagtgtcacttctaacaatagaaatccccctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttggtggactcagctattgagtttcatagtgtcacttctaacaatagaaatccccctc 260
Query: 61 atgtctcatccctcatcgctctgtctctgtctctatctgtctctgtctgtctctgtctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atgtctcatccctcatcgctctgtctctgtctctatctgtctctgtctgtctctgtctgt 320
Query: 121 ctgtctttctctccctctctttctctctttctctgtctctctctctcaaatgccaggaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtctttctctccctctctttctctctttctctgtctctctctctcaaatgccaggaac 380
Query: 181 tgtccttgcaacccttggtccactttacatctgtcctttcatctctttccctacatcatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtccttgcaacccttggtccactttacatctgtcctttcatctctttccctacatcatg 440
Query: 241 tgtgaatagttcagtttttaaatatgcagctgcaaattccattggctataccacagacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgaatagttcagtttttaaatatgcagctgcaaattccattggctataccacagacaa 500
Query: 301 tatagtcacttgttgatggtcacatgatgcatttccagtgtaaatcatcacatcttgaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tatagtcacttgttgatggtcacatgatgcatttccagtgtaaatcatcacatcttgaat 560
Query: 361 atctatgggtgtctcattcttggttgttttaacctaagtgaagctgcttggtgagcatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atctatgggtgtctcattcttggttgttttaacctaagtgaagctgcttggtgagcatat 620
Query: 421 gcttaagaaactgacaaggaatttcaacaaagtatccacaccaggcaggagatctccaga 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gcttaagaaactgacaaggaatttcaacaaagtatccacaccaggcaggagatctccagg 680
Query: 481 acata------gttttctattcttactactgtgattgattgattgattgattgattgatt 534
||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 acatatgcgtagttttctattcttactactgtgattgattgattgattgattgatt---- 736
Query: 535 gatttgtcacctcttacagacacatagaggttgttcgggtttttaacttgtatttgcctg 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 ----tgtcacctcttacagacacatagaggttgttcgggtttttaacttgtatttgcctg 792
Query: 595 gtggttaatgaatatatatatgtatacatacatacatatatattctttaatgaaatactt 654
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 793 gtggttaatgaatatatatatgtatacatacatacatatatattctttaatgaaatactt 852
Query: 655 actgacattggttagt 670
||||| ||||||||||
Sbjct: 853 actgaaattggttagt 868
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 43
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_f01.g1 MSMg01no275_f01.g1 CHROMAT_FILE:
MSMg01no275_f01.g1 PHD_FILE: MSMg01no275_f01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:02 2005
(239 letters)
>mm_chr10_5190790_5191434
Length = 645
Score = 408 bits (211), Expect = e-118
Identities = 233/243 (95%), Gaps = 6/243 (2%)
Strand = Plus / Minus
Query: 1 aaatagttcctgggttgggttacagatttgcagaaggtagaacagtatttaaccccaaat 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaatagtttctgggttgggttacagatttgcagaaggtagaacagtatttaaccccaaat 384
Query: 61 ccataaaaatgcttctgccaagggggcattaaattaaatactctacaagtaaagagatga 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 383 ccataaaaatgcttctgccaagggggcattaacttaaatactctacaagtaaagagatga 324
Query: 121 agaaaaatcccattggagagacagaatccactgaccccttgagctatttaatttcagcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agaaaaatcccattggagagacagaatccactgaccccttgagctatttaatttcagcgc 264
Query: 181 cccccc--cccccg----attgtgttagctttttcacttgagagtagtaagtgtgtctga 234
|||||| |||||| |||||||||||||||||||||||||||||||||| | |||||
Sbjct: 263 ccccccgccccccgctcgattgtgttagctttttcacttgagagtagtaagtatatctga 204
Query: 235 tgt 237
|||
Sbjct: 203 tgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 645
Length adjustment: 9
Effective length of query: 230
Effective length of database: 636
Effective search space: 146280
Effective search space used: 146280
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
