Query= MSMg01no275_k24.b1 MSMg01no275_k24.b1 CHROMAT_FILE:
MSMg01no275_k24.b1 PHD_FILE: MSMg01no275_k24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:28 2005
(318 letters)
>mm_chr10_5192465_5193182
Length = 718
Score = 567 bits (293), Expect = e-166
Identities = 310/317 (97%), Gaps = 4/317 (1%)
Strand = Plus / Minus
Query: 4 ggaattcagttcttat--tttctgagtttcatacagggaggatttgaaatgtacaataac 61
|||||||||||||||| || || |||||||||||||||||||||||||||||||||||
Sbjct: 518 ggaattcagttcttatagtt--tgtgtttcatacagggaggatttgaaatgtacaataac 461
Query: 62 ccagagttctccatttctccccctcttgaactcacattaaaaagttataaaaatgcatat 121
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 460 ccagagttctccatttctcctcctcttgaactcacattaaaaagttataaaaatgcatat 401
Query: 122 catacatgtctttgagagcttttatgtttaaaaaagtctgtcccacactatgtttcttgg 181
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 400 catacatgtctttgagagcttttatgtttaaaaaagtctgtcccacactatttttcttgg 341
Query: 182 aaacacaccatagcattttattagagctgtcttgttcttggtattccatatttgtaaata 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 aaacacaccatagcattttattagagctgtcttgttcttggtattccatatttgtaaata 281
Query: 242 taattactcgttactaattgtaattgctttgagatttcatgcatggacagaaattgccaa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 taattactcgttactaattgtaattgctttgagatttcatgcatggacagaaattgccaa 221
Query: 302 ccttacctcctggttga 318
|||||||||||||||||
Sbjct: 220 ccttacctcctggttga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 718
Length adjustment: 9
Effective length of query: 309
Effective length of database: 709
Effective search space: 219081
Effective search space used: 219081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no275_k24.g1 MSMg01no275_k24.g1 CHROMAT_FILE:
MSMg01no275_k24.g1 PHD_FILE: MSMg01no275_k24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:15:28 2005
(116 letters)
>mm_chr10_5042885_5043400
Length = 516
Score = 199 bits (103), Expect = 4e-56
Identities = 112/115 (97%)
Strand = Plus / Plus
Query: 1 cacacagaaatatcatggtgacaattgatggaatattctggaattcaaggcagacatgac 60
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 cacacagaaatgtcatggtgacaattgatggaatattctggaattcaagggagacatgac 260
Query: 61 tagcatttaattctgggattcccttgttttgtggaagcccgagcacagatcttcc 115
||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagcatttaattctgggtttcccttgttttgtggaagcccgagcacagatcttcc 315
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 116
Length of database: 516
Length adjustment: 8
Effective length of query: 108
Effective length of database: 508
Effective search space: 54864
Effective search space used: 54864
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
