Query= MSMg01no276_j18.b1 MSMg01no276_j18.b1 CHROMAT_FILE:
MSMg01no276_j18.b1 PHD_FILE: MSMg01no276_j18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:35 2005
(321 letters)
>mm_chr10_112914404_112915124
Length = 721
Score = 605 bits (313), Expect = e-178
Identities = 316/317 (99%)
Strand = Plus / Minus
Query: 5 gaattcatatattaaatgtgcaaaagtgtaagccaatatcttataaatatttattttctt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 gaattcatatattaaatgtgcaaaagtgtaagccaatatcttataaatatttattttctt 462
Query: 65 ccatgaagtgttttttcttaatatacttgcatttatagttaagttaataaataagctttt 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 ccatgaagtgttttttgttaatatacttgcatttatagttaagttaataaataagctttt 402
Query: 125 aaatactttaagtcataattcagtgactctttaagatgtaagtatctaaacttaaagtct 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 aaatactttaagtcataattcagtgactctttaagatgtaagtatctaaacttaaagtct 342
Query: 185 acaggtcagtgtagagatggtttagcgaacaaaatgcttgctgtatggcatcttaagagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 acaggtcagtgtagagatggtttagcgaacaaaatgcttgctgtatggcatcttaagagc 282
Query: 245 tagtttcccaggtaaccacataaattaagggtgacacggcagaccacatctgatcccatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 tagtttcccaggtaaccacataaattaagggtgacacggcagaccacatctgatcccatt 222
Query: 305 gctttgcgggtagagac 321
|||||||||||||||||
Sbjct: 221 gctttgcgggtagagac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 721
Length adjustment: 9
Effective length of query: 312
Effective length of database: 712
Effective search space: 222144
Effective search space used: 222144
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_j18.g1 MSMg01no276_j18.g1 CHROMAT_FILE:
MSMg01no276_j18.g1 PHD_FILE: MSMg01no276_j18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:16:35 2005
(372 letters)
>mm_chr10_112754970_112755741
Length = 772
Score = 665 bits (344), Expect = 0.0
Identities = 366/374 (97%), Gaps = 2/374 (0%)
Strand = Plus / Plus
Query: 1 ttgccctctttcaaattaatgacctcttaaatttaaatatttattcaaacaaagctatag 60
|||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||
Sbjct: 199 ttgccctctttcaaattaataacctcttaaatttaaatatttattcagacaaagctatag 258
Query: 61 caattttctttaagaatctataggaaacaatgattagcaatatctagaaaggatggttta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 caattttctttaagaatctataggaaacaatgattagcaatatctagaaaggatggttta 318
Query: 121 agtaaagcagcaaaatcattaatatatatatatat--gcatatatatgtaaacagttcat 178
|||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 319 agtaaagcagcaaaataattaatatatatatatatatgcatatatatgtaaacagttcat 378
Query: 179 gcttcagtatacacaataatgttaagatttgattaggaataagaaaacactctaattaaa 238
|||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 379 gcttcagtatacacaataatgttaagatttgattaggaataagacaacactctaactaaa 438
Query: 239 cctaattaggaaaaatgcatttgaagatgaaacagaggactagaaaaatgaattgtcaca 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 cctaattaggaaaaatgcatttgaagatgaaacagaggactagaaaaatgaattgtcaca 498
Query: 299 ggaacaatgaaacagaatgtctggggtaaatttccaccaaaaccctggagtgtctgaagc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggaacaatgaaacagaatgtctggggtaaatttccaccaaaaccctggagtgtctgaagc 558
Query: 359 tgaggtatagctga 372
||||||| ||||||
Sbjct: 559 tgaggtacagctga 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
