Query= MSMg01no276_p21.b1 MSMg01no276_p21.b1 CHROMAT_FILE:
MSMg01no276_p21.b1 PHD_FILE: MSMg01no276_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:02 2005
(314 letters)
>mm_chr10_123121408_123122121
Length = 714
Score = 565 bits (292), Expect = e-165
Identities = 307/312 (98%), Gaps = 2/312 (0%)
Strand = Plus / Minus
Query: 4 ggaattcttatttcttccctagtacctactggtggttcattctttgggaaattgttttta 63
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ggaattcttatttctttagtagtacctactggtggttcattctttgggaaattgttttta 365
Query: 64 tctcccagagtgaca-taaacacgtacagtaactagccctcctgatggaggtgaagcagc 122
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tctcccagagtga-attaaacacgtacagtaactagccctcctgatggaggtgaagcagc 306
Query: 123 tgctatccatcaacttaacccaggaaagggaactcagcttcttacaggaggtggtagagc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tgctatccatcaacttaacccaggaaagggaactcagcttcttacaggaggtggtagagc 246
Query: 183 tccattgtgtgcaaaggaaactagataccaaatttaacaggactgccactatcagtgtga 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tccattgtgtgcaaaggaaactagataccaaatttaacaggactgccactatcagtgtga 186
Query: 243 ctctgagcaagctgcagacaacatgccttagtttccgcacctgcaaaaacaatcagccgt 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 ctctgagcaagctgcagacaacatgccttagtttccgcacctgcaaaaacaatcagccgt 126
Query: 303 ttcacagtttta 314
||||||||||||
Sbjct: 125 ttcacagtttta 114
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no276_p21.g1 MSMg01no276_p21.g1 CHROMAT_FILE:
MSMg01no276_p21.g1 PHD_FILE: MSMg01no276_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:17:02 2005
(288 letters)
>mm_chr10_122943741_122944428
Length = 688
Score = 543 bits (281), Expect = e-159
Identities = 284/285 (99%)
Strand = Plus / Plus
Query: 1 cagaacagggggtttatagaagtcaacatactgtgtggtacataatgagtggagatgttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagaacagggggtttatagaagtcaacatactgtgtggtacataatgagtggagatgttt 260
Query: 61 ttgtttgctttagttttaagtgttcttatatacagctatctttttgtatcaaattgatat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgtttgctttagttttaagtgttcttatatacagctatctttttgtatcaaattgatat 320
Query: 121 tgtatttaatgatgtagtaagtagtgtgcacaaatagaatcaagcaccacataggtaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtatttaatgatgtagtaagtagtgtgcacaaatagaatcaagcaccacataggtaaaa 380
Query: 181 ttccacaaagctgctgattacaggctgggtctgctctatgcattaaagctgtattgtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttccacaaagctgctgattacaggctgggtctgctctatgcattaaagctgtattgtctt 440
Query: 241 atcagctaaggtgcatccactgaggccgtctctcagcaagatacc 285
||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 atcagctaaggtgcatccactgaagccgtctctcagcaagatacc 485
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 688
Length adjustment: 9
Effective length of query: 279
Effective length of database: 679
Effective search space: 189441
Effective search space used: 189441
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
