Query= MSMg01no277_o11.b1 MSMg01no277_o11.b1 CHROMAT_FILE:
MSMg01no277_o11.b1 PHD_FILE: MSMg01no277_o11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:07 2005
(367 letters)
>mm_chr10_28563498_28564263
Length = 766
Score = 663 bits (343), Expect = 0.0
Identities = 361/367 (98%), Gaps = 1/367 (0%)
Strand = Plus / Plus
Query: 1 aatatttcttacttggctgtgatttcagaaacacaatactctgaagcatttataggtgca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatatttcttacttggctgtgatttcagaaacacaatactctgaagcatttataggtgca 260
Query: 61 tttaccagcctcctggagtcctcacaaccaagggaaggtgccaactgctctcctgggagg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaccagcctcctggagtcctcacaaccaagggaaggtgccaactgctctcctgggagg 320
Query: 121 ctctagtgtgagtgacctgaagtttatgaaaataatattagtccagaaggtgtctgtacg 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctagtgtgagtgacctgaagttcatgaaaataatattagtccagaaggtgtctgtacg 380
Query: 181 actaaaaaaagaaagcaccaaaatcagaaacaaaacaactccccacgcaaaaaactaaaa 240
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 381 actaaaaaaagaaagcaccaaaatcagaaacaaaacaactccccacccaaaaaactaaaa 440
Query: 241 ccaatcaaaaccaaaacaaacaacaacaaacactccgcccccgcccacaaaacctccttc 300
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 441 ccaatcaaaaccaaaacaaacaacaacaaacactccgcccc-gcccacaaaacctcctcc 499
Query: 301 acctttgcccaaggaggtcagttcttcaaatgaaagacatttaatcccagagccaaagag 360
||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 500 acctttgcccaaggaggtcagtttttcagatgaaagacatttaatcccagagccaaagag 559
Query: 361 tcctggc 367
|||||||
Sbjct: 560 tcctggc 566
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 766
Length adjustment: 9
Effective length of query: 358
Effective length of database: 757
Effective search space: 271006
Effective search space used: 271006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no277_o11.g1 MSMg01no277_o11.g1 CHROMAT_FILE:
MSMg01no277_o11.g1 PHD_FILE: MSMg01no277_o11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:07 2005
(671 letters)
>mm_chr10_28724929_28725999
Length = 1071
Score = 1259 bits (651), Expect = 0.0
Identities = 666/671 (99%), Gaps = 1/671 (0%)
Strand = Plus / Minus
Query: 1 ttttgaactattaaaatgtgagtggcagcggttaagagcactgactgctcttccacaggt 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 809 ttttgaactattaaaatgtgagtggcagcggttaagaacactgactgctcttccacaggt 750
Query: 61 cctgggttcaattcccagaaatcacattgtggcttacaaccatctgtaataggatctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 cctgggttcaattcccagaaatcacattgtggcttacaaccatctgtaataggatctgat 690
Query: 121 gccctcttctggtgtgtctgaagacaactacagtgtactcatataaataaaataaatttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 gccctcttctggtgtgtctgaagacaactacagtgtactcatataaataaaataaatttt 630
Query: 181 aaaaaattaaaatgtgagtggtttattgtggtctcacaaaattctgtggtgattagaaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aaaaaattaaaatgtgagtggtttattgtggtctcacaaaattctgtggtgattagaaag 570
Query: 241 tccattgtgaattttctcttaggtactgaataataccatgacctaaataataatttaaat 300
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 569 tccattgagaattttctcttaggtactgaataataccatgacctaaagaataatttaaat 510
Query: 301 agcacgtgcttaataaaaatatattctaaatgaaaattaaagactaaatgtttattttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 509 agcacgtgcttaataaaaatatattctaaatgaaaattaaagactaaatgtttattttcc 450
Query: 361 tcccatgatgtactccttagagctcttatgtaatttgatgaatagtttattcatctagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tcccatgatgtactccttagagctcttatgtaatttgatgaatagtttattcatctagca 390
Query: 421 attgtgaactgtggctgctgggaaatgaactctgattatctgtaagagcagcacatgttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 attgtgaactgtggctgctgggaaatgaactctgattatctgtaagagcagcacatgttc 330
Query: 481 ttaaccactgagccatctccccatatcctcaaaattattccccttgttccatcattgaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 ttaaccactgagccatctccccatatcctcaaaattattccccttgttccatcattgaat 270
Query: 541 ttcttctctaatgtctatatattcatttttctaggatcagtattttttttaacagaagaa 600
|||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 269 ttcttctctaatgtctatatattcatttttttaggatcagtattttttt-aacagaagaa 211
Query: 601 agttagttataaataaaataaagttaccctctataacaaccagacatcaaagatgagaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 agttagttataaataaaataaagttaccctctataacaaccagacatcaaagatgagaag 151
Query: 661 agtgttcatta 671
|||||||||||
Sbjct: 150 agtgttcatta 140
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space: 701321
Effective search space used: 701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
