Query= MSMg01no278_j18.b1 MSMg01no278_j18.b1 CHROMAT_FILE:
MSMg01no278_j18.b1 PHD_FILE: MSMg01no278_j18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:59 2005
(349 letters)
>mm_chr10_36630513_36631261
Length = 749
Score = 478 bits (247), Expect = e-139
Identities = 271/279 (97%)
Strand = Plus / Minus
Query: 1 ccctacccccagaagttaagcatgtttattatatacagttgaccaaagaaacaaggctca 60
|||||||||||||||||||||||||||||||||||||||||| ||| ||| || ||||||
Sbjct: 479 ccctacccccagaagttaagcatgtttattatatacagttgagcaaggaagcagggctca 420
Query: 61 tggtatacagatgaatcaaggaggcaggttaggttaatctctttaggagcagtcactgta 120
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 tggtacacagatgaatcaaggaggcaggttaggttaatctctttaggagcagtcactgta 360
Query: 121 ggggagaagtcttcaggccataaatatttgatactggtgggatgaaaagactatagtgga 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 359 ggggagaagtcttcaggccataaatatttgatagtggtgggatgaaaagactatagtgga 300
Query: 181 tatttcacaatcacactgtcagtatttacacttggaccagaggaaggatttgccatgttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tatttcacaatcacactgtcagtatttacacttggaccagaggaaggatttgccatgttt 240
Query: 241 ctgagccttactgggggtaagtctttgcaactcccatgg 279
|||||||||||||| |||||||||| |||||||||||||
Sbjct: 239 ctgagccttactggaggtaagtcttcgcaactcccatgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 749
Length adjustment: 9
Effective length of query: 340
Effective length of database: 740
Effective search space: 251600
Effective search space used: 251600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no278_j18.g1 MSMg01no278_j18.g1 CHROMAT_FILE:
MSMg01no278_j18.g1 PHD_FILE: MSMg01no278_j18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:18:59 2005
(323 letters)
>mm_chr10_36474252_36474974
Length = 723
Score = 580 bits (300), Expect = e-170
Identities = 318/324 (98%), Gaps = 2/324 (0%)
Strand = Plus / Plus
Query: 1 tgccagaaatagcccttggatcaggtcatggacactaaaatactcaaacttcactgtgga 60
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tgccagaaatagcccttggatcaggtcatggacactaaaatactcagccttcactgtgga 260
Query: 61 acgctattcaaccctgcctgtcatttactacctgcagtca-aggaagcctgctttagtgc 119
|||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 261 acgctattcaaccctgcctgtcatttactacctgcagtcacag-aagcctgctttagtgc 319
Query: 120 ttaacagaatttcaaacacaaaaatagaatttcctttttgaaagagatcagcctctggtc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttaacagaatttcaaacacaaaaatagaatttcctttttgaaagagatcagcctctggtc 379
Query: 180 ttatcctcaaacttgggaaataatacaaataggatgaaatcataacacatggagtacttt 239
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 ttatcctcagacttgggaaataatacaaataggatgaaatcataacacatggagtacttt 439
Query: 240 catgaatgtagaagacgtgtgccctgggggcaaatctggtgctttgaaccagtgcattcc 299
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 440 catgaatgtagaagacgtgtgccctgggggcaaatctggggctttgaaccagtgcattcc 499
Query: 300 agtgtggcactctgctttacttta 323
||||||||||||||||||||||||
Sbjct: 500 agtgtggcactctgctttacttta 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
