Query= MSMg01no279_c09.b1 MSMg01no279_c09.b1 CHROMAT_FILE:
MSMg01no279_c09.b1 PHD_FILE: MSMg01no279_c09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:40 2005
(691 letters)
>mm_chr10_84119899_84120988
Length = 1090
Score = 1249 bits (646), Expect = 0.0
Identities = 664/670 (99%), Gaps = 1/670 (0%)
Strand = Plus / Minus
Query: 21 ccttgagattgctatttagtgtttaagccttcagagtgccaaattctccttttcacacaa 80
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 ccttgagattgctatttagtgtttaagccttcagagtgccaaattctccttttcacacaa 830
Query: 81 actggttgcaaaattaaagacattaggcagccttaattacattatcagaacagctgggat 140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 actggttgcaaaattaaagacattaggcagccttaattacattatcagaacagctgggat 770
Query: 141 taggcaatctctgaagtcaggacggcattcttttgtccctggatggaaatccctggcttt 200
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 769 taggcaatctctgaagtcaggccggcattcttttgtccctggatggaaatccctggcttt 710
Query: 201 ccagggtgctggattttggtgctgttccatatctctcccatacaaagcaagctgccttag 260
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 ccagggtgctgg-gtttggtgctgttccatatctctcccatacaaagcaagctgccttag 651
Query: 261 aaacaaaaaaattgcagacaaagaactgagtaacgtgcaacaaataatgaacacattacc 320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 aaacaaaaaaattgcagacaaagaactgagtaacgtgcaacaaataatgaacacattacc 591
Query: 321 aaaaaagaaaaggtaggtgcaaagattaagcctgaaatcagtaggttttgctaacaccta 380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 aaaaaagaaaaggtaggtgcaaagattaagcctgaaatcagtaggttttgctaacaccta 531
Query: 381 ctggcagccggcctggcaaccctctggtgacagtcagactgagggaaagctcactgggcc 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 ctggcagccggcctggcaaccctctggtgacagtcagactgagggaaagctcactgggcc 471
Query: 441 agtggagacaactctgttatctaaagctgaagcccatttcccggcctcatccctcgggtg 500
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 470 agtggagacaactctgttatctaaagctgaagcccatttcccggcctcatcccacgggtg 411
Query: 501 ggcaccagtagctattgtttttacacattcttgccaacacaatacctgctctgtgcttac 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 ggcaccagtagctattgtttttacacattcttgccaacacaatacctgctctgtgcttac 351
Query: 561 actgttcactaagctatgttttcttgctcctgggagtcctctttttaactctaatttctt 620
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 350 actgttcactaagctatgttttcttgctcctgggagtcctctttgtaactctaatttctt 291
Query: 621 aagcaacaggatatcctctctagactcctcctgactcccttctgtattccttgaaacaac 680
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 290 aagcaacaggatatcctctctacactcctcctgactcccttctgtattccttgaaacaac 231
Query: 681 ccatttttta 690
||||||||||
Sbjct: 230 ccatttttta 221
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1090
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1080
Effective search space: 735480
Effective search space used: 735480
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_c09.g1 MSMg01no279_c09.g1 CHROMAT_FILE:
MSMg01no279_c09.g1 PHD_FILE: MSMg01no279_c09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:40 2005
(352 letters)
>mm_chr10_83944611_83945362
Length = 752
Score = 681 bits (352), Expect = 0.0
Identities = 352/352 (100%)
Strand = Plus / Plus
Query: 1 gtcctcctctcccacaacacttttctttttaaccagatgaagaacatgatttggacgctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gtcctcctctcccacaacacttttctttttaaccagatgaagaacatgatttggacgctg 260
Query: 61 cacgctagagcggcgcttacaagttaccgacccagaggctccttgcctgacttgtggcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacgctagagcggcgcttacaagttaccgacccagaggctccttgcctgacttgtggcca 320
Query: 121 tggttaactgtatcagccggattagcttgagagtcagcgagttctcgaatgagttggaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tggttaactgtatcagccggattagcttgagagtcagcgagttctcgaatgagttggaat 380
Query: 181 cacctaagagcatcttactttctcatcagtttcttcaatacagccctgtctgcctgattc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacctaagagcatcttactttctcatcagtttcttcaatacagccctgtctgcctgattc 440
Query: 241 ctagacatggtaatgcccttaggcgatcggggaaccattttcacagctctgaggcattaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctagacatggtaatgcccttaggcgatcggggaaccattttcacagctctgaggcattaa 500
Query: 301 ataacagcctcattctttggataatgaaggatacggcccacttggagtgtgt 352
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataacagcctcattctttggataatgaaggatacggcccacttggagtgtgt 552
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
