Query= MSMg01no279_e21.b1 MSMg01no279_e21.b1 CHROMAT_FILE:
MSMg01no279_e21.b1 PHD_FILE: MSMg01no279_e21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:52 2005
(691 letters)
>mm_chr10_83854553_83855649
Length = 1097
Score = 1237 bits (640), Expect = 0.0
Identities = 678/694 (97%), Gaps = 8/694 (1%)
Strand = Plus / Plus
Query: 5 gaattccagattccgagcttcctgaggacagggactgtgtgtcagtcattgtcccagcag 64
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccagattgtgagcttcctgaggacagggactgtgtgtcagtcattgtcccagcag 264
Query: 65 ggagaagagaccctggcaggttgtaggggactcagtaatgcctgctaaattaaactgttt 124
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggagaagagagtctggcaggttgtaggggactcagtaatgcctgctaaattaaactgttt 324
Query: 125 ggataagcctattgatgagagtctattcccagagcccaccaaccagcagagggagcggct 184
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 ggataagcctattgatgagagtct-ttcccagagcccaccaaccagcagagggagcggct 383
Query: 185 gtgtcagatccgggctatgaggagccacgcccacccgccatacccacgccccggctgagt 244
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 384 gtgtcagatccgggctatgaggagccacgcccacccgccatacccacaccccggctgagt 443
Query: 245 tttaccttaatgttgcagttgtcatcaagcagtatgttctccagcttcaagtcccggtgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tttaccttaatgttgcagttgtcatcaagcagtatgttctccagcttcaagtcccggtgg 503
Query: 305 accacacctttctgcaacgaggaaacggaagaact------gagcaggagcaggagccgg 358
|||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
Sbjct: 504 accacaccattctgcaacgaggaaacggaagaactgagcaggagcaggagcaggagccag 563
Query: 359 agcaggagcgtgtgagatgacagacaagagagctctggggagggggcagcggaggccggg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agcaggagcgtgtgagatgacagacaagagagctctggggagggggcagcggaggccggg 623
Query: 419 cacagggaacaagtctgacagatgaaagcaatgcaccagccagtcccggtggtcttcacc 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 cacagggaacaagtctgacagatgaaagcaatgcaccagccagtcccggtggtcttcacc 683
Query: 479 tccatccttcaggcctgctctcgctgtcaggacgctccccagacagcaaccagcgacagg 538
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 684 tccatccttcaggcctgctctcactgtcaggacgctccccagacagcaaccagcgacagg 743
Query: 539 agagcattagtcactttctgtgtggttaacagaaaaatgactggaatccattctcccccc 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agagcattagtcactttctgtgtggttaacagaaaaatgactggaatccattctcccccc 803
Query: 599 c-agagcctgtaaaccagcagggggattctttgtgggaatgtaattccactgtgtctgag 657
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ccagagcctgtaaaccagcagggggattctttgtgggaatgtaattccactgtgtctgag 863
Query: 658 acagggtcccagggacacagcagacatctcagtg 691
||||||||||||||||||||||||||||||||||
Sbjct: 864 acagggtcccagggacacagcagacatctcagtg 897
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1097
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1087
Effective search space: 740247
Effective search space used: 740247
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no279_e21.g1 MSMg01no279_e21.g1 CHROMAT_FILE:
MSMg01no279_e21.g1 PHD_FILE: MSMg01no279_e21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:19:52 2005
(282 letters)
>mm_chr10_84017097_84017778
Length = 682
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%)
Strand = Plus / Minus
Query: 1 cagagttgagagaatacagactttaatcaagttcttgcacacatgcctttgcaaatgcac 60
|||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 482 cagacttgagagaatacagactttaatcaagttcttgcacacatgcatttgcaaatgcac 423
Query: 61 gtagagcaatgggagggaggaagtgggagggcccagggaggcactccacccagcagagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gtagagcaatgggagggaggaagtgggagggcccagggaggcactccacccagcagagca 363
Query: 121 gccaaggggaacacatttcctagcatccgtgccccagagtttgctttggtttggttttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gccaaggggaacacatttcctagcatccgtgccccagagtttgctttggtttggttttca 303
Query: 181 cgaggctatctaagttcactctgaagctgtctaaatttctcttcagttccccaatgtctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cgaggctatctaagttcactctgaagctgtctaaatttctcttcagttccccaatgtctc 243
Query: 241 tgaccatatctatgtatttagactgccttctaagtgagcgtg 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgaccatatctatgtatttagactgccttctaagtgagcgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
