Query= MSMg01no280_m01.b1 MSMg01no280_m01.b1 CHROMAT_FILE:
MSMg01no280_m01.b1 PHD_FILE: MSMg01no280_m01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:40 2005
(299 letters)
>mm_chr10_104580969_104581668
Length = 700
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%), Gaps = 1/289 (0%)
Strand = Plus / Minus
Query: 1 gagaaatacaggaaagaaataaagtcattgtaaatcatgaacttggtttttcttccttat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gagaaatacaggaaagaaataaagtcattgtaaatcatgaacttggtttttcttccttat 397
Query: 61 acagagtgaatttaattttagaatgcattagtaacagatttcttaactttaaattttgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 acagagtgaatttaattttagaatgcattagtaacagatttcttaactttaaattttgct 337
Query: 121 tctctagtcaagtttgtcatgctttcaattaaaaggtagtaactcagcaggtggattttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 tctctagtcaagtttgtcatgctttcaattaaaaggtagtaactcagcaggtggattttt 277
Query: 181 t-ccccagctgtcagaattcttctaaaatatcatttggaactacttgactccaaagggac 239
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ttccccagctgtcagaattcttctaaaatatcatttggaactacttgactccaaagggac 217
Query: 240 ctgacaattagagtgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 288
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 216 ctgacaattagagtgatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 168
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 7
Number of HSP's successfully gapped: 1
Length of query: 299
Length of database: 700
Length adjustment: 9
Effective length of query: 290
Effective length of database: 691
Effective search space: 200390
Effective search space used: 200390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_m01.g1 MSMg01no280_m01.g1 CHROMAT_FILE:
MSMg01no280_m01.g1 PHD_FILE: MSMg01no280_m01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:40 2005
(289 letters)
>mm_chr10_104423994_104424682
Length = 689
Score = 503 bits (260), Expect = e-147
Identities = 281/288 (97%)
Strand = Plus / Plus
Query: 1 aattgaagagctgtagttatccacttggatatgggatccaccctcaacccaatctctaca 60
||||||||||| |||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 201 aattgaagagcggtagttatccacttggatgggggatccaccctcaaccaaatctctaca 260
Query: 61 accaatctcaaggtctagagcttacaacctctgataaaaagaacatcatcacataccctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accaatctcaaggtctagagcttacaacctctgataaaaagaacatcatcacataccctg 320
Query: 121 tggcatccaggagtaatggaagaatggagtgacctcactgaggctgtaaatctgagtgat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 321 tggcatccaggagtaatggaagaatggagtgacctcactgaggctgtaaatctgagcggt 380
Query: 181 cacttcactttcacacctgtggcaccaggaaaatactgaggtctcaataaatttctgata 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacttcactttcacacctgtggcaccaggaaaatactgaggtctcaataaatttctgatg 440
Query: 241 tgtgatagattaatgaaggacaaatgctgaatcaaataatgtttagta 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgatagattaatgaaggacaaatgctgaatcaaataatgtttagta 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
