Query= MSMg01no280_o05.b1 MSMg01no280_o05.b1 CHROMAT_FILE:
MSMg01no280_o05.b1 PHD_FILE: MSMg01no280_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:50 2005
(506 letters)
>mm_chr10_67380842_67381746
Length = 905
Score = 955 bits (494), Expect = 0.0
Identities = 500/502 (99%), Gaps = 1/502 (0%)
Strand = Plus / Minus
Query: 5 gaattctgccaacttcgcctaccaacagagcactccacccacactgtttcctgctttcgt 64
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 gaattctgccaactt-gtctaccaacagagcactccacccacactgtttcctgctttcgt 647
Query: 65 ctttgccttggctgcccatccaggctttcattagcataaaaatgcatctactaggatgga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 ctttgccttggctgcccatccaggctttcattagcataaaaatgcatctactaggatgga 587
Query: 125 ggcagtggaaagactgggcccatccaactctcccacagagaggttgcccagtttaaccaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 ggcagtggaaagactgggcccatccaactctcccacagagaggttgcccagtttaaccaa 527
Query: 185 acctcctacagctaactatgggcatacatgtggcctttacatttagcccaagcactgttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 acctcctacagctaactatgggcatacatgtggcctttacatttagcccaagcactgttc 467
Query: 245 tgcaggaagcctacagcacagagcattggcccatcttcttatctggctcatgttggaccc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 tgcaggaagcctacagcacagagcattggcccatcttcttatctggctcatgttggaccc 407
Query: 305 caccaagaaacaaagtatctcacagtgttcattctggctttggtgcgtgggtgggggtgt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 caccaagaaacaaagtatctcacagtgttcattctggctttggtgcgtgggtgggggtgt 347
Query: 365 ggtttctaaaagatgtctattcccagcttttatggatggcctactccctgcagattcact 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 ggtttctaaaagatgtctattcccagcttttatggatggcctactccctgcagattcact 287
Query: 425 tgagctcacagactgtcactgcatttgagagactttccacagtgttgcttggtggttgcc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 tgagctcacagactgtcactgcatttgagagactttccacagtgttgcttggtggttgcc 227
Query: 485 atgacaacaaagatgtaataga 506
||||||||||||||||||||||
Sbjct: 226 atgacaacaaagatgtaataga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 905
Length adjustment: 10
Effective length of query: 496
Effective length of database: 895
Effective search space: 443920
Effective search space used: 443920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no280_o05.g1 MSMg01no280_o05.g1 CHROMAT_FILE:
MSMg01no280_o05.g1 PHD_FILE: MSMg01no280_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:21:50 2005
(293 letters)
>mm_chr10_67220689_67221381
Length = 693
Score = 536 bits (277), Expect = e-157
Identities = 289/293 (98%)
Strand = Plus / Plus
Query: 1 atttcgcttggtcctgcccaaggagaaaggactgtggtccagatcttgcttttcctgaaa 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 atttcgcttggtcctgcccaaggagaaaggactgtggtccagagcttgcttttcctgaaa 260
Query: 61 gaagttacatctcttcttttggcagaatggactgtttaaattagatagttcttaagactc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 gaagttacatctcttcttttggcagaatggactgtttaaattagatagttcttaagcctc 320
Query: 121 attgtcagtttgatgacatcaggaaagcaaattcaaggaccttctgttgaactattcctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 attgtcagtttgatgacatcaggaaagcaaattcaaggaccttctgttgaactattcttc 380
Query: 181 aaccagtctaatctttatcagccatgtagcctgggaggacccactgttctctcaaagctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaccagtctaatctttatcagccatgtagcctgggaggacccactgttctctcaaagctc 440
Query: 241 ctaagactcctcaggcatgaaagaaataggcaggacatcaatgccatatcttg 293
||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 ctaagactcctcaggcatgaaagaaataggcaggacatcaatgccgtatcttg 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 693
Length adjustment: 9
Effective length of query: 284
Effective length of database: 684
Effective search space: 194256
Effective search space used: 194256
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
