TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTGTAGCTATAAAATACAGGACAAAAGAGCCCCCAGAATATATGAGGA
AAAAAAAGTCAGTTCTCCACAGCTGCTTCATCCAATATTCTGTGCCTCAT
AATCAAAATGTAAAATTACTTTTAAGACGAATAAAATAGGCTTATCAAGA
GCAGAATAAGTAGAAAATAATAAGACACAGACAAATCCTCTTCAGTGCTC
AGTGGACACGATCCCTGTACCCGTGTTTTATGAAACAAGAGCAGGGCCCC
ATCATACTAAAAACCTGCCCTGGATAGTCTGAGCCCCTTAGAACCAGGCT
GAGTAGTCCCCAGGGTACAGGTCAATATATTCTTACAGAGAGTGTACCCA
GGAGACTTTTAAGGAAGCTTTGTTTACAGACTTTGACTCTCAGAAACAGA
CTTCATGTTGATTTCTCTTTTTCAAACACTTTGTGTTATGCAGGGGCCAT
GAGCTCCTCCAACCCAGCGGAGGGTAAGGTCTTGGAACATCACTTGTGCC
GCCAATTGAGTTGGTGAAGGGAATTTGAAGGGTTTGTAGGAGATGATTCT
GAGGGAAAGCATCTCCTGGGCTGTGCTTGTCACTTCGCTGGGCAGATATT
AAATCCAGGCAGTGATGTCTTTAATCGCAAACACTAGGAGGGAGGATAGA
GAAGAACTGTCGAGTGCCCAGGCTGATG

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTCTTTCTTTCTTTCTTTTTTTTTTT
TTTTGGTTTTTTAAGACATGGTTTCTCTGTGTAGTCCTGGCTGTCCTAGA
ACTCACTCTGTAGACCAGGCTGGACTTGAACTCAGAAATTTGCCTGCTAC
TGCCTCCCAAGTGTTGGGATTAAAGGCGTGCGCCACCACCACCTGGCCTG
CATGAATTCTTTTTTTTTTTTCCATTTTTATTAGGTATTTAGCTCATTTA
CATTTCCAATGCTATACCAAAAGTCCCCCATACCCACCCACCCCCACTTC
CCTACCCCCCCATTCTTTTTTTTTGGCCCTGGCGTTCCCCTGCACTGGGG
CATATAAAGTTTGCGCGCCCCATGGGCCTCTCTTTCCAGTGATGGCCGAC
TAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCCGGGGTAC
TGGTTAGTTCGTAATGTTGTTCCACATATAGGGTTGCAGATCCCTGTTAG
CTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGAGCCCTGTGATCCATC
CATTAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCGGCATA
GTCTCACAAGAGACAGCTACATCTGGGTCCTTTCGATAAAATCTTGCTAG
CATATGCAATGGTGTCCAGCGTTGGAT

Query= MSMg01no289_n02.b1 MSMg01no289_n02.b1 CHROMAT_FILE:
MSMg01no289_n02.b1 PHD_FILE: MSMg01no289_n02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:24:12 2005
         (634 letters)



>mm_chr10_5796967_5798000
          Length = 1034

 Score = 1166 bits (603), Expect = 0.0
 Identities = 624/631 (98%), Gaps = 2/631 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctgtagctataaaatacaggacaaaagagcccccagaatatatgaggaaaaaaaa 64
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgtagctacaaaatacaggacaaaagagcccccagaatatatgaggaaaaaaaa 264

                                                                       
Query: 65  gtcagttctccacagctgcttcatccaatattctgtgcctcataatcaaaatgtaaaatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gtcagttctccacagctgcttcatccaatattctgtgcctcataatcaaaatgtaaaatt 324

                                                                       
Query: 125 acttttaagacgaataaaataggcttatcaagagcagaataagtagaaaataataagaca 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acttttaagacgaataaaataggcttatcaagagcagaataagtagaaaataataagaca 384

                                                                       
Query: 185 cagacaaatcctcttcagtgctcagtggacacgatccctgtacccgtgttttatgaaaca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagacaaatcctcttcagtgctcagtggacacgatccctgtacccgtgttttatgaaaca 444

                                                                       
Query: 245 agagcagggccccatcatactaaaaacctgccctggatagtctgag-ccccttagaacca 303
           |||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 445 agagcagggccccatcatactaaaaacctgccctggatagtctgaggcccct-agaacca 503

                                                                       
Query: 304 ggctgagtagtccccagggtacaggtcaatatattcttacagagagtgtacccaggagac 363
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 504 ggctgagtagtccccagggtacaggtcaatatattcttacagagggtgtacccaggagac 563

                                                                       
Query: 364 ttttaaggaagctttgtttacagactttgactctcagaaacagacttcatgttgatttct 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttttaaggaagctttgtttacagactttgactctcagaaacagacttcatgttgatttct 623

                                                                       
Query: 424 ctttttcaaacactttgtgttatgcaggggccatgagctcctccaacccagcggagggta 483
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 624 ctttttcaaacactttgtgttatgcaggggccatgagctcctccaacccagcggagggaa 683

                                                                       
Query: 484 aggtcttggaacatcacttgtgccgccaattgagttggtgaagggaatttgaagggtttg 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 aggtcttggaacatcacttgtgccgccaattgagttggtgaagggaatttgaagggtttg 743

                                                                       
Query: 544 taggagatgattctgagggaaagcatctcctgggctgtgcttgtcacttcgctgggcaga 603
           |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct: 744 taggagatgattctgagggaaagcatctcctgggctctgcctgtcacttcgctgggcaga 803

                                          
Query: 604 tattaaatccaggcagtgatgtctttaatcg 634
           |||||||||||||||||||||||||||||||
Sbjct: 804 tattaaatccaggcagtgatgtctttaatcg 834


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space:   638976
Effective search space used:   638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)